Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 6.4e-182 640.6 314 100.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.7e-121 439.9 286 72.4
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 3.7e-121 438.7 299 70.9
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.0e-119 433.0 291 71.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 6.5e-118 427.9 286 70.6
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.3e-115 419.5 319 66.5
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.2e-115 418.3 286 69.6
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 8.8e-115 417.5 286 69.2
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.6e-114 416.0 285 70.2
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 5.7e-114 414.8 286 66.4
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 7.5e-114 414.5 299 65.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.3e-113 413.7 285 70.2
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.3e-113 413.7 286 71.0
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.2e-113 412.9 286 67.8
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 2.8e-113 412.5 285 69.5
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.8e-112 409.8 285 68.8
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.6e-111 406.8 286 68.9
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.7e-111 406.0 290 66.9
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 3.8e-110 402.1 286 67.5
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 6.5e-110 401.4 286 65.7
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 6.5e-110 401.4 286 67.1
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 5.5e-109 398.3 286 67.1
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 7.2e-109 397.9 286 66.4
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 2.7e-108 396.0 288 66.7
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 4.7e-108 395.2 285 65.3
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.8e-107 393.3 286 66.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 5.2e-107 391.7 287 67.2
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 8.8e-107 391.0 285 64.2
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 8.8e-107 391.0 286 65.4
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.2e-106 390.6 286 64.7
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 7.5e-106 387.9 298 64.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.7e-105 386.7 285 63.9
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.2e-105 386.3 298 63.8
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.2e-105 386.3 286 63.6
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 2.8e-105 386.0 286 64.0
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.8e-105 386.0 285 63.5
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 4.9e-105 385.2 286 64.7
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 6.3e-105 384.8 363 54.3
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.1e-104 384.0 285 64.2
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.8e-104 383.3 286 63.3
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.4e-104 382.9 285 63.2
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.3e-102 377.1 287 62.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 2.5e-101 372.9 286 61.2
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 4.3e-101 372.1 289 61.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.3e-101 372.1 367 52.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 5.6e-101 371.7 286 62.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 3.6e-100 369.0 350 54.9
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.1e-100 368.2 350 55.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 6.1e-100 368.2 287 64.1
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.1e-100 368.2 287 64.1
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 8.0e-100 367.9 286 61.9
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.0e-99 365.9 287 63.4
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 8.9e-99 364.4 287 61.0
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 7.5e-98 361.3 286 60.5
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.3e-97 360.5 287 60.6
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 6.4e-97 358.2 286 58.7
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.4e-96 356.3 286 59.4
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.2e-96 355.9 286 59.4
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.2e-96 355.9 287 58.5
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 5.9e-95 351.7 288 59.4
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 5.4e-88 328.6 254 59.8
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.7e-86 323.6 284 57.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.0e-86 322.8 271 60.5
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.5e-85 320.5 291 55.3
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 8.9e-83 311.2 350 48.9
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 5.1e-78 295.4 140 100.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.9e-72 276.9 325 49.8
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.2e-71 274.2 217 62.2
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 4.3e-69 265.8 177 67.2
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.4e-64 248.8 287 45.6
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 8.7e-62 241.5 286 43.7
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 7.6e-58 228.4 253 52.2
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 7.6e-50 201.8 124 71.0
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 5.1e-46 189.1 162 56.8
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 4.3e-45 186.0 164 54.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.4e-42 176.4 224 43.3
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 2.5e-40 170.2 116 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.8e-38 164.1 157 52.2
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 9.6e-37 158.3 130 62.3
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.5e-29 134.4 85 68.2
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.7e-29 132.5 94 64.9
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.8e-28 130.2 101 57.4
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.1e-27 126.7 153 51.0
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 7.7e-26 122.1 335 29.9
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.0e-25 121.7 117 51.3
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.6e-23 112.8 104 55.8
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.8e-22 110.9 300 29.3
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.2e-20 104.0 67 73.1
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.8e-20 103.6 67 71.6
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.8e-20 103.6 115 51.3
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.2e-20 102.1 67 71.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.4e-19 100.5 67 71.6
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.0e-17 95.1 69 60.9
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 5.0e-17 92.8 163 42.3
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-16 90.9 90 53.3
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 4.2e-16 89.7 75 58.7
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.4e-14 84.7 96 39.6
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.5e-13 81.3 266 27.1
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.1e-07 60.8 57 52.6
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 6.1e-07 59.3 88 43.2


User provided reference genes

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