Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 5.2e-128 461.1 235 100.0
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 2.6e-79 299.3 235 68.5
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.7e-74 281.6 208 69.2
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 7.4e-74 281.2 236 64.0
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.6e-73 280.0 208 69.7
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 2.1e-73 279.6 236 65.7
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 2.8e-73 279.3 234 65.0
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 1.4e-72 276.9 233 63.5
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 5.3e-72 275.0 240 64.2
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 2.0e-71 273.1 233 63.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 7.2e-69 264.6 222 63.1
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 3.5e-68 262.3 231 61.5
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 3.0e-67 259.2 235 60.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.9e-66 256.5 232 62.5
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 7.4e-66 254.6 243 59.7
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 9.7e-66 254.2 236 58.9
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 1.4e-64 250.4 236 59.3
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 5.3e-64 248.4 237 56.1
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 6.9e-64 248.1 210 62.9
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.2e-63 247.3 210 62.9
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 1.5e-63 246.9 241 56.8
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 3.4e-63 245.7 241 59.8
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.0e-62 244.2 236 57.2
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 2.2e-62 243.0 240 57.5
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 3.8e-62 242.3 215 57.7
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 3.8e-62 242.3 234 58.5
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.1e-61 240.7 238 55.9
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.4e-61 240.4 236 57.2
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 3.2e-61 239.2 240 57.9
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.2e-61 239.2 234 56.8
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 9.4e-61 237.7 247 56.7
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.6e-60 236.9 214 61.2
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 2.1e-60 236.5 233 56.7
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.1e-60 236.5 210 61.0
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.7e-60 236.1 234 56.4
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 4.6e-60 235.3 219 57.1
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.8e-59 233.4 232 54.3
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 5.1e-59 231.9 221 58.8
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 5.1e-59 231.9 223 55.6
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 5.1e-59 231.9 242 54.1
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 8.8e-59 231.1 206 58.7
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.0e-58 229.9 241 55.6
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 2.0e-58 229.9 239 53.6
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 2.0e-58 229.9 223 57.0
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.5e-58 229.6 233 55.4
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.5e-58 229.6 232 54.7
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.3e-58 229.2 233 55.4
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.3e-58 229.2 233 55.4
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 7.4e-58 228.0 237 55.7
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 7.4e-58 228.0 238 54.6
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 9.7e-58 227.6 232 57.8
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 1.3e-57 227.3 233 54.9
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.3e-57 227.3 235 54.0
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.2e-57 226.5 236 55.5
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 3.7e-57 225.7 219 55.7
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.1e-56 224.2 239 53.1
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 3.1e-56 222.6 217 55.3
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 4.1e-56 222.2 220 55.9
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 5.3e-56 221.9 241 50.2
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.2e-55 220.7 237 51.5
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 4.5e-55 218.8 231 53.7
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 4.5e-55 218.8 232 56.0
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.0e-54 217.6 240 52.1
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.0e-54 217.6 200 60.5
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.7e-54 216.9 213 54.0
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 1.7e-54 216.9 255 49.0
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.7e-54 216.9 252 53.2
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.9e-54 216.1 205 56.1
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 2.9e-54 216.1 240 51.7
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 5.0e-54 215.3 239 51.5
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 8.5e-54 214.5 231 51.9
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.1e-53 214.2 208 55.8
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.1e-53 214.2 236 50.4
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.4e-53 213.8 246 52.8
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.4e-53 213.8 236 53.0
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 1.9e-53 213.4 236 51.3
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.2e-52 210.7 206 55.3
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 2.1e-52 209.9 238 50.4
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.1e-52 209.9 240 51.7
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.1e-52 209.9 240 51.7
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 4.7e-52 208.8 238 52.1
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 4.7e-52 208.8 240 48.8
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 7.9e-52 208.0 245 52.7
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 1.8e-51 206.8 213 52.6
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 2.3e-51 206.5 238 51.7
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 2.3e-51 206.5 235 51.9
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 6.7e-51 204.9 216 53.7
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 1.1e-50 204.1 238 51.3
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.6e-50 203.0 224 51.8
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.6e-50 203.0 224 51.8
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 4.4e-50 202.2 232 50.4
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 5.7e-50 201.8 261 45.2
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.7e-49 200.3 251 47.0
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 2.2e-49 199.9 222 52.7
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 6.3e-49 198.4 210 54.3
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.1e-48 197.6 209 52.6
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.4e-48 197.2 235 48.5
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 4.1e-48 195.7 234 47.4
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 5.3e-48 195.3 219 51.6
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.2e-47 194.1 195 52.8
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.6e-47 193.7 211 50.7
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 2.6e-47 193.0 276 44.2
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 5.9e-47 191.8 215 51.6
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.5e-45 187.2 223 49.3
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 3.2e-45 186.0 197 54.3
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.2e-45 186.0 186 55.9
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 4.2e-45 185.7 235 50.2
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.2e-44 184.1 240 46.2
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 3.6e-44 182.6 200 54.0
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 4.7e-44 182.2 211 48.8
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.3e-41 174.1 187 52.9
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.7e-41 172.6 245 46.9
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.3e-38 164.1 190 52.1
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 1.7e-38 163.7 183 50.8
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 1.7e-38 163.7 185 53.5
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.7e-38 163.7 190 53.7
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.1e-37 161.0 186 52.2
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 1.1e-37 161.0 190 51.6
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 1.9e-37 160.2 217 46.1
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 7.5e-34 148.3 171 49.1
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.7e-33 147.1 220 41.4
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 2.7e-31 139.8 141 56.7
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 4.5e-23 112.5 239 38.9
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 4.5e-23 112.5 219 34.2
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 2.5e-21 106.7 80 71.2
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 2.3e-19 100.1 132 46.2
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 8.6e-14 81.6 167 38.9
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.1e-13 81.3 108 43.5
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 6.4e-09 65.5 53 54.7
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 1.0e-06 58.2 118 33.1
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.3e-06 57.0 207 27.5


User provided reference genes

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