Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 4.2e-116 421.4 217 100.0
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 6.9e-42 174.9 173 60.7
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 9.9e-41 171.0 162 61.7
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 1.4e-39 167.2 178 57.3
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.4e-39 166.4 163 58.3
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 5.5e-39 165.2 165 57.6
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 1.1e-36 157.5 167 56.3
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 7.4e-36 154.8 156 57.7
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 2.4e-34 149.8 165 54.5
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 4.0e-34 149.1 183 52.5
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 6.9e-34 148.3 181 51.9
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.2e-33 147.5 166 54.2
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.5e-33 147.1 164 56.1
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 2.6e-33 146.4 164 52.4
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 4.5e-33 145.6 171 53.8
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 5.8e-33 145.2 168 52.4
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 1.7e-32 143.7 162 54.3
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 1.7e-32 143.7 168 52.4
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 2.9e-32 142.9 166 51.8
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 4.9e-32 142.1 161 50.9
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 8.4e-32 141.4 169 51.5
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 3.2e-31 139.4 168 45.2
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 4.2e-31 139.0 175 45.1
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 5.5e-31 138.7 171 46.8
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 5.5e-31 138.7 157 54.1
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 1.6e-30 137.1 175 44.6
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 1.6e-30 137.1 158 51.3
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 2.7e-30 136.3 168 44.0
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 4.6e-30 135.6 159 49.7
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 4.6e-30 135.6 155 56.8
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 6.0e-30 135.2 166 46.4
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 2.3e-29 133.3 165 49.1
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 3.9e-29 132.5 168 49.4
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 5.1e-29 132.1 110 63.6
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 6.7e-29 131.7 172 48.3
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 6.7e-29 131.7 168 42.3
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.5e-28 130.6 153 51.6
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 1.9e-28 130.2 158 47.5
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 2.5e-28 129.8 154 46.8
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 4.3e-28 129.0 169 49.1
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 4.3e-28 129.0 151 47.0
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 4.3e-28 129.0 168 47.6
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 5.7e-28 128.6 165 46.7
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 9.6e-28 127.9 172 46.5
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 9.6e-28 127.9 183 43.2
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 1.6e-27 127.1 184 44.0
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.6e-27 127.1 158 48.1
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.6e-27 127.1 184 47.3
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 2.1e-27 126.7 154 46.1
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 3.7e-27 125.9 166 45.8
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 4.8e-27 125.6 174 48.3
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 6.3e-27 125.2 170 45.9
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 6.3e-27 125.2 118 57.6
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 6.3e-27 125.2 175 49.1
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 1.8e-26 123.6 163 45.4
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 2.4e-26 123.2 164 45.7
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.4e-26 123.2 173 45.1
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 5.3e-26 122.1 156 45.5
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 6.9e-26 121.7 178 46.6
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 9.0e-26 121.3 157 46.5
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 1.5e-25 120.6 171 48.5
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 2.0e-25 120.2 174 45.4
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 2.6e-25 119.8 158 46.2
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 3.4e-25 119.4 90 67.8
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 3.4e-25 119.4 166 46.4
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 3.4e-25 119.4 158 48.1
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 4.5e-25 119.0 162 46.9
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 5.9e-25 118.6 174 40.2
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 1.0e-24 117.9 185 43.8
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 6.5e-24 115.2 185 43.2
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 6.5e-24 115.2 165 44.8
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 8.5e-24 114.8 158 44.9
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 1.1e-23 114.4 173 44.5
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 1.1e-23 114.4 96 61.5
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.5e-23 113.2 183 42.1
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 5.5e-23 112.1 161 44.7
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 9.3e-23 111.3 161 44.7
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.1e-22 110.2 183 42.1
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.1e-22 108.6 76 67.1
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 6.1e-22 108.6 155 45.8
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 7.9e-22 108.2 89 64.0
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.0e-21 107.8 171 43.9
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.3e-21 107.5 92 63.0
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 1.3e-21 107.5 147 44.2
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 3.9e-21 105.9 101 56.4
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 5.1e-21 105.5 154 42.9
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 5.1e-21 105.5 85 68.2
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 5.1e-21 105.5 85 68.2
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 6.7e-21 105.1 171 42.7
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 6.7e-21 105.1 171 41.5
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 6.7e-21 105.1 171 42.7
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 3.3e-20 102.8 165 41.8
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 3.3e-20 102.8 156 39.1
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 7.4e-20 101.7 147 46.3
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 6.3e-19 98.6 92 57.6
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 6.9e-18 95.1 84 57.1
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.7e-16 90.5 88 54.5
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 2.6e-12 76.6 81 50.6
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 6.9e-10 68.6 120 35.8
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 1.5e-09 67.4 100 44.0
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 2.6e-09 66.6 89 46.1
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 4.5e-09 65.9 67 49.3
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 1.0e-08 64.7 89 46.1
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 1.0e-08 64.7 89 46.1
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.7e-08 63.9 59 55.9
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 6.5e-08 62.0 152 36.8


User provided reference genes

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