Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g11190 Coffea canephora HOM05D007726 ORTHO05D008819 2.2e-78 295.4 134 100.0
Cc10_g11210 Coffea canephora HOM05D007726 ORTHO05D008819 3.0e-56 221.9 134 75.4
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 2.7e-36 155.6 128 57.0
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 6.6e-35 151.0 133 54.1
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 3.3e-34 148.7 133 53.4
Actinidia34726 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.6e-33 146.4 126 56.3
QL02p023649 Quercus lobata HOM05D007726 ORTHO05D008819 7.5e-31 137.5 132 50.8
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 3.7e-30 135.2 126 50.8
CANSAT25G2565 Cannabis sativa HOM05D007726 ORTHO05D008819 6.4e-30 134.4 126 50.0
Lsat_1_v5_gn_4_28421 Lactuca sativa HOM05D007726 ORTHO05D008819 1.4e-29 133.3 134 49.3
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 1.9e-29 132.9 126 51.6
HanXRQChr17g0565271 Helianthus annuus HOM05D007726 ORTHO05D008819 3.2e-29 132.1 127 48.8
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 1.2e-28 130.2 134 44.8
RcHm_v2.0_Chr7g0225531 Rosa chinensis HOM05D007726 ORTHO05D008819 2.0e-28 129.4 126 49.2
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 2.7e-28 129.0 125 49.6
RcHm_v2.0_Chr7g0231221 Rosa chinensis HOM05D007726 ORTHO05D008819 3.5e-28 128.6 122 50.8
FvH4_5g31300 Fragaria vesca HOM05D007726 ORTHO05D008819 6.0e-28 127.9 121 49.6
FAN18G2255 Fragaria x ananassa HOM05D007726 ORTHO05D008819 6.0e-28 127.9 121 49.6
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 7.8e-28 127.5 126 50.0
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 7.8e-28 127.5 126 50.0
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 7.8e-28 127.5 126 49.2
ECA234G1595 Erigeron canadensis HOM05D007726 ORTHO05D008819 1.7e-27 126.3 127 47.2
Prupe.1G556700 Prunus persica HOM05D007726 ORTHO05D008819 1.7e-27 126.3 125 49.6
MSTRG.25451 Avicennia marina HOM05D007726 ORTHO05D008819 1.5e-26 123.2 128 46.9
Lj7C388T5 Lonicera japonica HOM05D007726 ORTHO05D008819 5.6e-26 121.3 133 42.1
FvH4_5g30670 Fragaria vesca HOM05D007726 ORTHO05D008819 9.5e-26 120.6 126 46.8
FAN08G0648 Fragaria x ananassa HOM05D007726 ORTHO05D008819 9.5e-26 120.6 126 46.8
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 1.6e-25 119.8 129 46.5
Eucgr.F02895 Eucalyptus grandis HOM05D007726 ORTHO05D008819 2.8e-25 119.0 126 42.1
FAN13G1334 Fragaria x ananassa HOM05D007726 ORTHO05D008819 3.6e-25 118.6 126 46.0
FAN18G4305 Fragaria x ananassa HOM05D007726 ORTHO05D008819 3.6e-25 118.6 126 46.8
RcHm_v2.0_Chr7g0226391 Rosa chinensis HOM05D007726 ORTHO05D008819 1.4e-24 116.7 125 44.0
Cpa.g.sc30.96 Carica papaya HOM05D007726 ORTHO05D008819 5.2e-24 114.8 127 44.1
Potri.013G104100 Populus trichocarpa HOM05D007726 ORTHO05D008819 5.2e-24 114.8 135 46.7
Sabra13G0090000 Salix brachista HOM05D007726 ORTHO05D008819 2.0e-23 112.8 135 45.2
Ciclev10020371m.g Citrus clementina HOM05D007726 ORTHO05D008819 2.2e-22 109.4 133 43.6
CSS0041692 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 2.9e-22 109.0 127 44.9
CSS0044196 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 2.9e-22 109.0 127 44.9
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 8.3e-22 107.5 86 52.3
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 1.4e-21 106.7 130 45.4
MELO3C024088.2 Cucumis melo HOM05D007726 ORTHO05D008819 3.2e-21 105.5 125 40.0
ClCG09G010150 Citrullus lanatus HOM05D007726 ORTHO05D008819 7.1e-21 104.4 122 40.2
CsaV3_7G024580 Cucumis sativus L. HOM05D007726 ORTHO05D008819 2.1e-20 102.8 125 39.2
Cfa012985 Carpinus fangiana HOM05D007726 ORTHO05D008819 7.8e-20 100.9 105 49.5
Atru.chr13.2339 Acer truncatum HOM05D007726 ORTHO05D008819 3.9e-19 98.6 128 40.6
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 3.9e-19 98.6 123 38.2
TWI14G0263 Tripterygium wilfordii HOM05D007726 ORTHO05D008819 1.2e-17 93.6 126 41.3
Hund16767 Selenicereus undatus HOM05D007726 ORTHO05D008819 8.1e-17 90.9 124 40.3
Rhsim02G0204800 Rhododendron simsii HOM05D007726 ORTHO05D008819 4.0e-16 88.6 124 40.3
SGA_v2.0_scaffold118G32546 Striga asiatica HOM05D007726 ORTHO05D008819 8.9e-16 87.4 127 35.4
Manes.18G107800 Manihot esculenta HOM05D007726 ORTHO05D008819 4.4e-15 85.1 129 37.2
PSO339G1195 Papaver somniferum HOM05D007726 ORTHO05D008819 1.3e-14 83.6 126 34.1
AUR62004583 Chenopodium quinoa HOM05D007726 ORTHO05D008819 1.4e-13 80.1 132 34.1
EL10Ac1g00153 Beta vulgaris HOM05D007726 ORTHO05D008819 3.2e-13 79.0 133 32.3
Hund16766 Selenicereus undatus HOM05D007726 ORTHO05D008819 7.1e-13 77.8 133 33.8
Actinidia22323 Actinidia chinensis HOM05D007726 ORTHO05D008819 3.5e-12 75.5 136 38.2
PSO384G2295 Papaver somniferum HOM05D007726 ORTHO05D008819 1.7e-11 73.2 126 31.0
Nitab4.5_0002389g0090 Nicotiana tabacum HOM05D007726 ORTHO05D008819 3.9e-11 72.0 122 35.2
CAN.G1270.6 Capsicum annuum HOM05D007726 ORTHO05D008819 5.1e-11 71.6 124 37.1
PGSC0003DMG400024288 Solanum tuberosum HOM05D007726 ORTHO05D008819 8.6e-11 70.9 124 36.3
Migut.C01272 Erythranthe guttata HOM05D007726 ORTHO05D008819 3.3e-10 68.9 133 31.6
Nitab4.5_0003295g0110 Nicotiana tabacum HOM05D007726 ORTHO05D008819 9.6e-10 67.4 125 34.4
Solyc09g072680.2 Solanum lycopersicum HOM05D007726 ORTHO05D008819 1.2e-09 67.0 124 35.5
Sopen09g028490 Solanum pennellii HOM05D007726 ORTHO05D008819 1.2e-09 67.0 124 35.5
Nn1g09442 Nelumbo nucifera HOM05D007726 ORTHO05D008819 2.1e-09 66.2 131 31.3
Actinidia13258 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.8e-08 63.2 59 45.8
Migut.C01271 Erythranthe guttata HOM05D007726 ORTHO05D008819 3.4e-07 58.9 130 28.5
Sc23g0001620 Simmondsia chinensis HOM05D007726 ORTHO05D008819 1.3e-06 57.0 135 34.8
Actinidia13257 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.7e-06 56.6 57 45.6


User provided reference genes

Program Settings