Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.7e-55 218.0 113 100.0
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.2e-40 169.9 96 82.3
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.2e-40 169.9 96 82.3
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.6e-40 168.7 96 83.3
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.7e-40 167.5 100 80.0
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 7.5e-40 167.2 107 75.7
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.7e-39 166.0 96 81.2
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.7e-39 166.0 96 84.4
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 2.2e-39 165.6 96 81.2
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 4.8e-39 164.5 96 82.3
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 6.3e-39 164.1 96 83.3
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 8.3e-39 163.7 96 81.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 8.3e-39 163.7 96 81.2
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 4.1e-38 161.4 98 75.5
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 4.1e-38 161.4 98 75.5
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 9.1e-38 160.2 96 80.2
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.2e-37 159.8 98 78.6
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.6e-37 159.5 97 86.6
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.6e-37 159.5 102 83.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.7e-37 158.7 98 80.6
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 3.5e-37 158.3 95 81.1
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 3.5e-37 158.3 95 80.0
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 4.5e-37 157.9 96 78.1
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.7e-37 157.1 97 80.4
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.0e-36 156.8 97 80.4
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 1.3e-36 156.4 96 77.1
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.2e-36 155.6 97 78.4
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 2.9e-36 155.2 97 78.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.8e-36 154.8 97 79.4
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 5.0e-36 154.5 96 85.4
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.0e-36 154.5 96 85.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 5.0e-36 154.5 96 85.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 8.5e-36 153.7 105 73.3
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.5e-35 152.9 97 82.5
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.5e-35 152.1 97 79.4
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.5e-35 152.1 96 84.4
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 5.5e-35 151.0 96 77.1
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 5.5e-35 151.0 95 78.9
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 9.5e-35 150.2 94 76.6
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 9.5e-35 150.2 96 76.0
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 1.2e-34 149.8 95 83.2
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 2.1e-34 149.1 101 73.3
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 2.8e-34 148.7 94 76.6
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 3.6e-34 148.3 105 77.1
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.6e-34 148.3 97 80.4
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 3.6e-34 148.3 95 78.9
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 4.7e-34 147.9 90 81.1
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 4.7e-34 147.9 95 78.9
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 6.1e-34 147.5 96 77.1
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.0e-33 146.7 96 72.9
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.4e-33 146.4 106 75.5
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.4e-33 146.4 106 75.5
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.8e-33 146.0 96 81.2
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.3e-33 145.6 102 78.4
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 8.8e-33 143.7 88 78.4
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 8.8e-33 143.7 98 76.5
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.2e-32 143.3 95 76.8
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.2e-32 143.3 95 73.7
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.5e-32 142.9 100 78.0
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 5.7e-32 141.0 94 77.7
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 7.5e-32 140.6 97 76.3
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.7e-31 139.4 95 75.8
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.7e-31 139.4 92 73.9
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 2.2e-31 139.0 102 79.4
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 3.7e-31 138.3 107 72.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 4.9e-31 137.9 110 74.5
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.8e-30 136.0 94 78.7
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.4e-30 135.6 95 74.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 7.0e-30 134.0 85 76.5
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.2e-29 133.3 106 70.8
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.2e-29 133.3 100 77.0
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.5e-29 131.7 103 73.8
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 5.9e-29 131.0 88 73.9
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 5.9e-29 131.0 97 75.3
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 5.9e-29 131.0 97 75.3
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 5.9e-29 131.0 103 71.8
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 7.8e-29 130.6 99 70.7
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 1.0e-28 130.2 105 69.5
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.0e-28 130.2 89 79.8
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.3e-28 129.8 99 70.7
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.3e-28 129.8 101 65.3
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.3e-28 129.8 105 73.3
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.3e-28 129.8 107 70.1
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 1.7e-28 129.4 105 71.4
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 3.8e-28 128.3 103 69.9
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 6.6e-28 127.5 78 82.1
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 8.6e-28 127.1 108 69.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 8.6e-28 127.1 109 69.7
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.1e-27 126.7 107 70.1
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.1e-27 126.7 107 70.1
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.1e-27 126.7 107 70.1
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.1e-27 126.7 107 70.1
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.5e-27 126.3 108 69.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.5e-27 126.3 83 80.7
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 4.3e-27 124.8 110 65.5
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 4.7e-26 121.3 95 66.3
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 6.8e-25 117.5 95 61.1
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.0e-24 115.9 105 63.8
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 4.4e-24 114.8 78 82.1
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 9.8e-24 113.6 96 70.8
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.3e-23 113.2 108 63.0
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 2.2e-23 112.5 106 62.3
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.2e-23 112.5 100 66.0
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 2.2e-23 112.5 64 84.4
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 6.4e-23 110.9 103 64.1
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 8.3e-23 110.5 108 60.2
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 1.8e-22 109.4 103 65.0
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 9.2e-22 107.1 107 58.9
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.6e-21 106.3 107 60.7
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 6.6e-20 100.9 97 60.8
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.0e-17 91.7 70 75.7
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.2e-16 90.1 82 68.3
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 4.4e-16 88.2 89 65.2
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 2.9e-15 85.5 57 75.4
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.2e-14 82.0 88 52.3
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 5.6e-11 71.2 98 51.0
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 9.5e-11 70.5 55 78.2
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 4.7e-10 68.2 50 66.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 2.3e-09 65.9 109 43.1
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 3.1e-09 65.5 96 46.9
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 4.1e-06 55.1 97 43.3


User provided reference genes

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