Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 7.7e-80 300.4 153 100.0
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 1.8e-41 172.9 122 73.0
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 2.4e-41 172.6 143 61.5
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 2.4e-41 172.6 144 67.4
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 4.1e-41 171.8 146 67.1
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 7.0e-41 171.0 147 66.7
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 9.2e-41 170.6 146 65.8
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 4.5e-40 168.3 113 74.3
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 4.5e-40 168.3 113 74.3
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 4.5e-40 168.3 147 61.2
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 5.9e-40 167.9 147 62.6
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 5.9e-40 167.9 148 61.5
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 1.7e-39 166.4 145 61.4
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 1.7e-39 166.4 147 63.3
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.3e-39 166.0 147 61.9
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.9e-39 165.6 108 75.9
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 5.0e-39 164.9 147 63.3
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 8.6e-39 164.1 154 61.7
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 8.6e-39 164.1 109 76.1
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 1.1e-38 163.7 119 68.9
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.1e-38 163.7 147 64.6
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 1.1e-38 163.7 133 65.4
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.1e-38 163.7 114 74.6
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 1.1e-38 163.7 145 62.1
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 1.5e-38 163.3 153 60.1
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 1.9e-38 162.9 113 73.5
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 1.9e-38 162.9 144 60.4
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 1.9e-38 162.9 115 68.7
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 2.5e-38 162.5 146 61.0
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 3.3e-38 162.2 115 71.3
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 4.3e-38 161.8 103 75.7
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 4.3e-38 161.8 116 70.7
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 4.3e-38 161.8 122 70.5
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 5.6e-38 161.4 139 63.3
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 7.3e-38 161.0 113 73.5
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.6e-37 159.8 151 63.6
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 1.6e-37 159.8 103 76.7
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 2.1e-37 159.5 151 59.6
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 2.8e-37 159.1 109 73.4
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 2.8e-37 159.1 103 76.7
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.8e-37 159.1 103 76.7
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.0e-36 157.1 144 59.7
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 1.0e-36 157.1 115 67.0
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.4e-36 156.8 104 76.0
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 1.8e-36 156.4 103 73.8
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.3e-36 156.0 115 67.8
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 3.0e-36 155.6 103 75.7
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 3.0e-36 155.6 103 75.7
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 4.0e-36 155.2 153 59.5
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 5.2e-36 154.8 99 72.7
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 6.8e-36 154.5 104 75.0
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 6.8e-36 154.5 152 59.2
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 8.9e-36 154.1 153 58.8
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 1.2e-35 153.7 119 68.1
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.2e-35 153.7 101 74.3
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 1.5e-35 153.3 152 60.5
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 2.6e-35 152.5 111 73.0
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 3.4e-35 152.1 115 74.8
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 4.4e-35 151.8 153 58.8
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 7.5e-35 151.0 117 65.8
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 7.5e-35 151.0 147 59.2
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 1.7e-34 149.8 111 66.7
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 2.9e-34 149.1 105 74.3
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 3.7e-34 148.7 103 73.8
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 8.3e-34 147.5 97 74.2
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.1e-33 147.1 104 69.2
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 3.2e-33 145.6 149 56.4
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 3.2e-33 145.6 145 54.5
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 4.1e-33 145.2 125 63.2
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 4.1e-33 145.2 103 70.9
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 1.3e-31 140.2 105 66.7
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 2.3e-31 139.4 150 54.0
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 2.3e-31 139.4 105 64.8
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 5.6e-30 134.8 104 67.3
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 1.2e-29 133.7 105 63.8
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 3.6e-29 132.1 92 65.2
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 6.2e-29 131.3 122 52.5
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.8e-28 129.8 122 63.9
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 2.3e-28 129.4 130 62.3
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 5.2e-28 128.3 119 58.8
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 5.2e-28 128.3 121 60.3
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.0e-27 126.3 161 51.6
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 7.5e-27 124.4 123 56.1
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 9.8e-27 124.0 80 75.0
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 9.8e-27 124.0 123 58.5
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.3e-26 123.6 121 59.5
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.3e-26 123.6 95 69.5
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 1.7e-26 123.2 147 49.0
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 2.9e-26 122.5 130 54.6
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 4.9e-26 121.7 70 80.0
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 8.3e-26 120.9 120 56.7
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.1e-25 120.6 80 72.5
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.4e-25 120.2 120 56.7
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 4.1e-25 118.6 121 57.9
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 2.0e-24 116.3 95 55.8
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 1.3e-23 113.6 146 45.2
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.7e-23 113.2 78 70.5
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 4.3e-22 108.6 61 80.3
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 3.6e-21 105.5 80 61.2
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 5.2e-20 101.7 91 56.0
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 4.1e-17 92.0 70 61.4
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 1.1e-14 84.0 54 74.1
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 7.3e-14 81.3 97 49.5
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 1.4e-12 77.0 107 36.4
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 2.3e-12 76.3 122 38.5
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.0e-11 73.2 51 66.7
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 1.3e-07 60.5 77 49.4
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 1.9e-06 56.6 107 39.3


User provided reference genes

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