Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g10750 Coffea canephora HOM05D026455 ORTHO05D034816 3.1e-114 415.6 291 100.0
Cc11_g04030 Coffea canephora HOM05D026455 ORTHO05D000029 6.9e-13 79.0 202 43.1
Cc09_g06900 Coffea canephora HOM05D000021 ORTHO05D000010 1.2e-09 68.2 51 62.7
Cc00_g15340 Coffea canephora HOM05D020204 ORTHO05D000010 4.6e-09 66.2 110 41.8
arahy.Tifrunner.gnm1.ann1.F7SJE8 Arachis hypogaea HOM05D000021 ORTHO05D000010 6.0e-09 65.9 166 28.3
SalBow6G0706 Salvia bowleyana HOM05D000021 ORTHO05D000010 2.3e-08 63.9 138 31.2
Cc09_g06890 Coffea canephora HOM05D000021 ORTHO05D000010 3.0e-08 63.5 101 42.6
Cc00_g26510 Coffea canephora HOM05D000021 ORTHO05D000010 5.1e-08 62.8 156 41.7
Cc08_g10200 Coffea canephora HOM05D000021 ORTHO05D000010 1.1e-07 61.6 55 56.4
CiPaw.10G129600 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.5e-07 61.2 203 26.6
Cpa.g.sc596.1 Carica papaya HOM05D000021 ORTHO05D000010 4.3e-07 59.7 44 68.2
Prupe.4G064400 Prunus persica HOM05D000021 ORTHO05D000010 4.3e-07 59.7 43 65.1
CiPaw.12G006800 Carya illinoinensis HOM05D000311 ORTHO05D000183 7.4e-07 58.9 120 33.3
Cc04_g14480 Coffea canephora HOM05D041214 ORTHO05D025128 9.6e-07 58.5 130 34.6
Lj2C302T5 Lonicera japonica HOM05D026455 ORTHO05D034816 9.6e-07 58.5 136 33.1
Migut.F01644 Erythranthe guttata HOM05D000053 ORTHO05D000035 1.3e-06 58.2 136 30.9
CSS0038481 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.6e-06 57.8 135 30.4
CiPaw.10G102200 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.8e-06 57.0 42 59.5
Ciclev10018259m.g Citrus clementina HOM05D000021 ORTHO05D000010 2.8e-06 57.0 138 30.4
Lj4A539T57 Lonicera japonica HOM05D012045 ORTHO05D022857 2.8e-06 57.0 158 29.1
Nitab4.5_0002185g0040 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.8e-06 57.0 57 57.9
Thecc.08G170300 Theobroma cacao HOM05D000021 ORTHO05D000010 2.8e-06 57.0 42 61.9
RcHm_v2.0_Chr5g0010981 Rosa chinensis HOM05D000021 ORTHO05D000010 3.7e-06 56.6 42 59.5
Haze_05410 Corylus avellana HOM05D000021 ORTHO05D000010 4.8e-06 56.2 128 30.5
PGSC0003DMG400026748 Solanum tuberosum HOM05D000021 ORTHO05D000010 6.2e-06 55.8 41 65.9
Cc03_g13350 Coffea canephora HOM05D000021 ORTHO05D000010 8.2e-06 55.5 173 26.6
Thecc.08G169800 Theobroma cacao HOM05D000021 ORTHO05D000010 8.2e-06 55.5 43 58.1


User provided reference genes

Program Settings