Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 1.6e-65 252.7 132 100.0
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 1.4e-61 239.6 130 92.3
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 1.4e-61 239.6 130 92.3
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 1.2e-60 236.5 130 92.3
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 1.2e-60 236.5 130 92.3
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 5.8e-60 234.2 130 90.8
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 5.8e-60 234.2 130 90.0
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 9.9e-60 233.4 130 91.5
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 9.9e-60 233.4 130 91.5
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 1.3e-59 233.0 130 88.5
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 1.7e-59 232.6 130 90.8
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 2.2e-59 232.3 130 90.0
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 2.2e-59 232.3 130 90.0
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 2.2e-59 232.3 130 90.8
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 2.2e-59 232.3 130 90.8
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 2.9e-59 231.9 130 90.0
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.8e-59 231.5 130 90.8
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 6.4e-59 230.7 130 90.8
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 6.4e-59 230.7 130 90.8
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 8.4e-59 230.3 130 89.2
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 1.1e-58 229.9 130 89.2
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 1.9e-58 229.2 130 89.2
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 1.9e-58 229.2 130 90.0
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 1.9e-58 229.2 130 88.5
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 2.4e-58 228.8 130 88.5
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.4e-58 228.8 130 90.0
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 2.4e-58 228.8 130 90.0
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 3.2e-58 228.4 130 89.2
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 3.2e-58 228.4 130 89.2
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 5.4e-58 227.6 130 87.7
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 5.4e-58 227.6 130 89.2
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 9.3e-58 226.9 130 87.7
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 1.2e-57 226.5 130 88.5
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 1.6e-57 226.1 130 88.5
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 2.1e-57 225.7 130 86.9
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 2.1e-57 225.7 130 86.2
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 2.7e-57 225.3 127 89.8
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 3.5e-57 224.9 130 86.2
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 3.5e-57 224.9 130 87.7
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 3.5e-57 224.9 130 87.7
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 4.6e-57 224.6 130 88.5
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 4.6e-57 224.6 130 88.5
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 4.6e-57 224.6 130 87.7
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 1.0e-56 223.4 130 85.4
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.0e-56 223.4 130 88.5
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 1.0e-56 223.4 130 86.2
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 2.3e-56 222.2 129 88.4
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 3.0e-56 221.9 130 86.9
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 3.0e-56 221.9 130 86.9
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 3.0e-56 221.9 130 86.9
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 3.0e-56 221.9 130 86.9
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 3.0e-56 221.9 130 86.9
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 3.9e-56 221.5 130 86.2
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 5.1e-56 221.1 130 86.2
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 5.1e-56 221.1 130 87.7
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 6.7e-56 220.7 130 86.2
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 6.7e-56 220.7 130 86.2
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 6.7e-56 220.7 130 86.2
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 8.7e-56 220.3 130 86.2
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 1.1e-55 219.9 129 87.6
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 1.5e-55 219.5 129 87.6
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 1.9e-55 219.2 129 87.6
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 3.3e-55 218.4 130 83.8
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 3.3e-55 218.4 130 86.2
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 3.3e-55 218.4 140 80.7
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 7.4e-55 217.2 130 84.6
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 7.4e-55 217.2 130 86.2
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 7.4e-55 217.2 130 86.2
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 9.6e-55 216.9 129 87.6
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 9.6e-55 216.9 130 86.2
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 1.3e-54 216.5 130 86.9
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 1.3e-54 216.5 130 86.9
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 1.6e-54 216.1 130 84.6
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.1e-54 215.7 129 84.5
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.1e-54 215.7 129 84.5
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 2.1e-54 215.7 129 84.5
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 2.1e-54 215.7 130 85.4
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 3.7e-54 214.9 130 84.6
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 3.7e-54 214.9 130 84.6
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 4.8e-54 214.5 130 84.6
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 2.4e-53 212.2 130 85.4
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 3.4e-52 208.4 130 81.5
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 9.9e-52 206.8 130 80.0
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.9e-51 205.3 130 79.2
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 7.9e-49 197.2 112 86.6
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 8.7e-48 193.7 112 86.6
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 4.0e-45 184.9 129 74.4
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.2e-44 183.3 136 75.7
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 7.6e-44 180.6 126 69.8
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 1.4e-42 176.4 130 74.6
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 2.5e-42 175.6 130 66.2
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 4.2e-42 174.9 129 67.4
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 7.1e-42 174.1 131 74.0
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 9.3e-42 173.7 130 72.3
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 1.6e-41 172.9 130 66.2
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 7.9e-41 170.6 130 72.3
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 6.3e-38 161.0 99 82.8
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 3.1e-37 158.7 91 85.7
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.1e-34 150.2 87 85.1
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.7e-33 145.6 136 61.8
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 2.0e-23 112.8 113 51.3
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 5.7e-23 111.3 57 96.5
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 2.8e-22 109.0 121 52.1
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 6.3e-22 107.8 57 93.0
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 2.0e-20 102.8 57 87.7
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 8.0e-17 90.9 99 53.5
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 9.1e-13 77.4 77 53.2
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.9e-10 69.7 36 97.2
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 4.2e-10 68.6 36 94.4
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 1.6e-09 66.6 36 91.7
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 2.1e-09 66.2 43 74.4
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 4.7e-09 65.1 41 78.0
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 2.0e-07 59.7 97 43.3
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 1.3e-06 57.0 53 54.7


User provided reference genes

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