Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 5.1e-66 254.2 125 100.0
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 4.2e-60 234.6 124 93.5
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 5.5e-60 234.2 124 92.7
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 1.2e-59 233.0 124 91.9
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 2.1e-59 232.3 124 91.9
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 2.7e-59 231.9 125 92.0
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 3.6e-59 231.5 126 88.9
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 8.0e-59 230.3 124 90.3
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 8.0e-59 230.3 124 90.3
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 1.0e-58 229.9 124 90.3
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 1.4e-58 229.6 124 90.3
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 1.8e-58 229.2 124 90.3
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 2.3e-58 228.8 124 89.5
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 3.0e-58 228.4 124 89.5
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 3.0e-58 228.4 124 90.3
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 6.7e-58 227.3 124 89.5
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 6.7e-58 227.3 124 89.5
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.8e-58 226.9 124 87.9
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.1e-57 226.5 124 87.9
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 1.1e-57 226.5 124 90.3
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 1.5e-57 226.1 124 89.5
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 1.5e-57 226.1 124 88.7
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.0e-57 225.7 124 87.9
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 2.0e-57 225.7 124 87.9
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 2.6e-57 225.3 124 88.7
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 2.6e-57 225.3 125 85.6
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 88.7
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 87.1
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 87.1
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 3.3e-57 224.9 125 86.4
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 87.1
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 89.5
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 3.3e-57 224.9 126 87.3
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 88.7
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 88.7
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 3.3e-57 224.9 124 87.9
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 4.4e-57 224.6 124 87.9
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 4.4e-57 224.6 124 88.7
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 5.7e-57 224.2 124 89.5
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 5.7e-57 224.2 124 87.9
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 7.4e-57 223.8 124 87.1
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 7.4e-57 223.8 124 86.3
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 7.4e-57 223.8 124 87.9
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 7.4e-57 223.8 124 88.7
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 7.4e-57 223.8 124 88.7
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 7.4e-57 223.8 124 87.9
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 9.7e-57 223.4 124 87.1
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 9.7e-57 223.4 124 88.7
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 9.7e-57 223.4 124 87.1
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 1.3e-56 223.0 124 87.1
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.1
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.1
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.1
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.1
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.1
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.1
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 1.7e-56 222.6 124 87.9
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 2.2e-56 222.2 125 84.8
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 2.8e-56 221.9 124 85.5
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 2.8e-56 221.9 124 87.9
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 2.8e-56 221.9 124 87.1
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 3.7e-56 221.5 124 87.1
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 3.7e-56 221.5 124 88.7
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 3.7e-56 221.5 124 88.7
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 4.8e-56 221.1 124 87.9
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.8e-56 221.1 125 87.2
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 4.8e-56 221.1 124 87.1
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 4.8e-56 221.1 119 91.6
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 4.8e-56 221.1 124 87.1
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 4.8e-56 221.1 124 86.3
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 6.3e-56 220.7 124 84.7
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 6.3e-56 220.7 124 87.9
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 6.3e-56 220.7 124 87.9
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 6.3e-56 220.7 124 87.9
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 6.3e-56 220.7 124 87.9
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 8.2e-56 220.3 125 83.2
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 1.4e-55 219.5 124 85.5
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 1.8e-55 219.2 124 85.5
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 7.0e-55 217.2 124 86.3
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 1.2e-54 216.5 124 85.5
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-54 216.5 125 84.8
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 3.5e-54 214.9 120 89.2
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 5.9e-54 214.2 124 85.5
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 1.0e-53 213.4 126 84.1
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 2.2e-53 212.2 124 84.7
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 2.9e-53 211.8 124 86.3
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 2.9e-53 211.8 124 83.9
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 3.8e-53 211.5 124 84.7
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 3.8e-53 211.5 124 83.9
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 5.0e-53 211.1 124 84.7
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 6.5e-53 210.7 124 83.9
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 8.5e-53 210.3 124 82.3
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 8.5e-53 210.3 124 82.3
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 8.5e-53 210.3 124 83.9
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 1.9e-52 209.1 124 83.1
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 1.9e-52 209.1 124 83.1
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 9.4e-52 206.8 124 83.9
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 1.2e-51 206.5 124 81.5
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 1.8e-50 202.6 120 82.5
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 5.3e-47 191.0 124 75.0
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 5.3e-47 191.0 122 76.2
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 1.2e-46 189.9 121 80.2
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 4.5e-46 188.0 122 74.6
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 1.7e-45 186.0 127 73.2
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.9e-44 182.6 122 71.3
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 3.2e-44 181.8 127 72.4
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 4.2e-44 181.4 194 53.1
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 4.2e-44 181.4 121 71.1
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 3.0e-42 175.3 121 70.2
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 4.0e-42 174.9 124 71.0
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 1.2e-41 173.3 123 72.4
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 5.7e-41 171.0 121 65.3
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.0e-37 160.2 125 61.6
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.1e-36 156.8 125 59.2
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 9.5e-36 153.7 80 91.2
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 2.8e-35 152.1 142 57.0
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 1.2e-33 146.7 119 58.8
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 3.4e-33 145.2 92 77.2
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 4.4e-33 144.8 76 90.8
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 3.7e-32 141.7 130 62.3
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 3.1e-31 138.7 74 87.8
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 3.1e-31 138.7 74 87.8
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 4.1e-31 138.3 75 85.3
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 3.5e-30 135.2 75 81.3
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 4.5e-30 134.8 74 83.8
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 4.5e-30 134.8 74 83.8
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 1.0e-29 133.7 74 83.8
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 3.6e-27 125.2 73 79.5
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 6.1e-27 124.4 139 52.5
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 3.4e-25 118.6 76 78.9
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.5e-20 103.2 125 41.6
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 5.2e-18 94.7 50 94.0
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 5.2e-18 94.7 61 80.3
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 2.4e-15 85.9 156 40.4
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 1.0e-13 80.5 109 43.1
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 1.5e-12 76.6 39 87.2
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 2.5e-12 75.9 70 61.4
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 2.3e-10 69.3 35 82.9
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 4.4e-09 65.1 68 50.0


User provided reference genes

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