Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g10240 Coffea canephora HOM05D007628 ORTHO05D007342 3.0e-43 177.9 80 100.0
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 1.6e-28 129.0 79 75.9
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.3e-25 119.4 80 73.8
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 4.5e-15 84.3 75 56.0
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 5.9e-15 84.0 78 48.7
QL02p025976 Quercus lobata HOM05D007628 ORTHO05D007342 1.0e-14 83.2 72 56.9
QL93p0163_0044 Quercus lobata HOM05D007628 ORTHO05D007342 1.0e-14 83.2 72 56.9
Lj4g0016425 Lotus japonicus HOM05D007628 ORTHO05D007342 2.9e-14 81.6 79 50.6
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 3.8e-14 81.3 77 54.5
RcHm_v2.0_Chr7g0228231 Rosa chinensis HOM05D007628 ORTHO05D007342 4.2e-13 77.8 71 53.5
FvH4_6g07490 Fragaria vesca HOM05D007628 ORTHO05D007342 9.4e-13 76.6 77 53.2
CSS0048807 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 2.1e-12 75.5 77 50.6
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 2.1e-12 75.5 71 53.5
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 2.1e-12 75.5 77 50.6
CSS0040221 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 2.7e-12 75.1 73 50.7
RcHm_v2.0_Chr7g0228201 Rosa chinensis HOM05D007628 ORTHO05D007342 3.6e-12 74.7 71 52.1
FAN08G2431 Fragaria x ananassa HOM05D007628 ORTHO05D007342 4.7e-12 74.3 77 51.9
FvH4_5g32180 Fragaria vesca HOM05D007628 ORTHO05D007342 8.0e-12 73.6 76 51.3
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 8.0e-12 73.6 74 51.4
arahy.Tifrunner.gnm1.ann1.UI0JR9 Arachis hypogaea HOM05D007628 ORTHO05D007342 1.4e-11 72.8 70 42.9
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.4e-11 72.8 79 49.4
CSS0007364 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.0e-11 71.6 73 49.3
RcHm_v2.0_Chr7g0228331 Rosa chinensis HOM05D007628 ORTHO05D007342 3.0e-11 71.6 70 50.0
Rhsim06G0114500 Rhododendron simsii HOM05D007628 ORTHO05D007342 5.2e-11 70.9 72 50.0
arahy.Tifrunner.gnm1.ann1.I9AMSX Arachis hypogaea HOM05D007628 ORTHO05D007342 6.7e-11 70.5 70 42.9
Rhsim06G0114400 Rhododendron simsii HOM05D007628 ORTHO05D007342 1.5e-10 69.3 73 49.3
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 2.0e-10 68.9 76 44.7
SalBow7G2761 Salvia bowleyana HOM05D007628 ORTHO05D007342 2.6e-10 68.6 54 59.3
Lalb_Chr01g0016231 Lupinus albus HOM05D007628 ORTHO05D007342 3.3e-10 68.2 62 53.2
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 3.3e-10 68.2 68 48.5
TPR.G34171 Trifolium pratense HOM05D007628 ORTHO05D007342 3.3e-10 68.2 66 48.5
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 4.4e-10 67.8 76 42.1
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 9.7e-10 66.6 55 52.7
QL02p025972 Quercus lobata HOM05D007628 ORTHO05D007342 9.7e-10 66.6 73 49.3
QL93p0163_0041 Quercus lobata HOM05D007628 ORTHO05D007342 9.7e-10 66.6 73 49.3
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.3e-09 66.2 61 52.5
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 1.3e-09 66.2 76 46.1
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.7e-09 65.9 80 50.0
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 1.8e-08 62.4 78 46.2
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.8e-08 62.4 79 45.6
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 2.4e-08 62.0 72 48.6
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 4.1e-08 61.2 56 51.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 7.0e-08 60.5 79 44.3
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 9.1e-08 60.1 80 47.5
RcHm_v2.0_Chr7g0228301 Rosa chinensis HOM05D007628 ORTHO05D007342 9.1e-08 60.1 63 49.2
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 1.6e-07 59.3 67 43.3
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 2.0e-07 58.9 78 43.6
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 2.7e-07 58.5 67 46.3
Actinidia25283 Actinidia chinensis HOM05D007628 ORTHO05D007342 3.5e-07 58.2 74 45.9
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 4.5e-07 57.8 78 43.6
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 4.5e-07 57.8 79 44.3
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 7.7e-07 57.0 80 43.8
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-06 56.2 49 61.2
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-06 56.2 49 61.2
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.3e-06 56.2 49 61.2
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 2.2e-06 55.5 78 39.7
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 2.9e-06 55.1 61 47.5
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 5.0e-06 54.3 62 48.4
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.5e-06 53.9 56 48.2
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.5e-06 53.5 48 54.2
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.5e-06 53.5 55 49.1


User provided reference genes

Program Settings