Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.2e-66 256.5 150 100.0
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 2.4e-38 162.5 149 61.7
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.9e-35 152.9 145 60.7
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.5e-32 143.3 145 57.2
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 2.0e-32 142.9 146 56.8
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 2.7e-29 132.5 144 51.4
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 6.0e-29 131.3 145 54.5
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 7.9e-29 131.0 144 56.2
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 1.3e-28 130.2 166 48.8
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 3.0e-28 129.0 138 54.3
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 3.9e-28 128.6 144 50.0
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 8.7e-28 127.5 138 56.5
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 8.7e-28 127.5 144 52.8
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-27 127.1 149 49.0
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 1.5e-27 126.7 145 52.4
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 7.4e-27 124.4 144 50.0
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 7.4e-27 124.4 136 55.1
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 2.8e-26 122.5 145 51.7
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 4.8e-26 121.7 145 52.4
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 6.2e-26 121.3 144 49.3
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 8.2e-26 120.9 145 46.9
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.4e-25 120.2 145 47.6
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 1.4e-25 120.2 145 49.0
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 2.4e-25 119.4 145 46.9
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 4.0e-25 118.6 144 49.3
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.2e-24 117.1 144 49.3
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 1.2e-24 117.1 144 48.6
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.2e-24 117.1 145 48.3
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 2.0e-24 116.3 145 48.3
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.0e-24 116.3 170 46.5
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 2.0e-24 116.3 144 48.6
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.6e-24 115.9 144 47.9
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 3.4e-24 115.5 137 51.8
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 4.5e-24 115.2 144 47.9
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 5.8e-24 114.8 153 48.4
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 7.6e-24 114.4 144 49.3
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.6e-24 114.4 144 47.9
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.3e-23 113.6 144 45.8
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 2.9e-23 112.5 146 44.5
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.9e-23 112.5 148 49.3
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 6.5e-23 111.3 142 45.8
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 1.1e-22 110.5 111 55.9
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.1e-22 110.5 164 47.6
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.9e-22 109.8 145 48.3
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 3.2e-22 109.0 140 50.7
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 5.5e-22 108.2 143 49.7
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 2.1e-21 106.3 142 44.4
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 2.7e-21 105.9 144 47.9
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 2.3e-20 102.8 148 43.2
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 3.9e-20 102.1 148 43.2
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 8.7e-20 100.9 138 46.4
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.1e-19 100.5 148 42.6
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.5e-19 100.1 138 46.4
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.9e-19 99.8 170 41.8
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 4.3e-19 98.6 141 43.3
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 5.7e-19 98.2 172 39.5
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 5.7e-19 98.2 145 44.8
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 1.3e-18 97.1 145 42.8
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.6e-18 96.7 133 46.6
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.6e-18 96.7 145 44.8
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 2.2e-18 96.3 145 42.8
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.1e-17 94.0 99 55.6
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 2.0e-16 89.7 112 51.8
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 5.9e-16 88.2 148 41.2
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.0e-15 87.4 119 44.5
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 5.0e-15 85.1 78 65.4
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 8.5e-15 84.3 143 41.3
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 5.5e-14 81.6 118 42.4
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.2e-13 80.5 138 41.3
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.6e-13 80.1 138 40.6
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.6e-13 80.1 138 40.6
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.6e-13 80.1 145 37.9
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.1e-13 79.7 145 39.3
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.1e-13 79.7 145 39.3
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.1e-13 79.7 145 39.3
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 4.6e-13 78.6 77 61.0
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 6.1e-13 78.2 119 41.2
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.1e-13 78.2 89 52.8
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 1.0e-12 77.4 145 37.2
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.9e-11 73.2 74 55.4
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 5.7e-11 71.6 96 40.6
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.8e-10 68.6 84 42.9
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.8e-09 66.6 130 39.2
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 2.6e-08 62.8 97 32.0
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.9e-07 59.3 130 35.4
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 8.5e-07 57.8 132 33.3
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 3.2e-06 55.8 112 39.3


User provided reference genes

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