Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 2.4e-57 225.3 115 100.0
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 1.2e-24 116.7 89 60.7
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 3.4e-24 115.2 86 60.5
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 4.5e-24 114.8 88 59.1
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 7.6e-24 114.0 81 60.5
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 1.3e-23 113.2 83 62.7
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 2.2e-23 112.5 86 62.8
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 5.0e-23 111.3 83 63.9
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 5.0e-23 111.3 115 47.8
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 5.0e-23 111.3 115 47.8
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 8.4e-23 110.5 109 51.4
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 1.4e-22 109.8 88 56.8
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 1.4e-22 109.8 87 58.6
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 2.5e-22 109.0 82 58.5
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 2.5e-22 109.0 86 59.3
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 3.2e-22 108.6 88 56.8
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 5.5e-22 107.8 75 64.0
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 7.2e-22 107.5 97 55.7
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 9.3e-22 107.1 82 61.0
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 9.3e-22 107.1 86 55.8
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 1.2e-21 106.7 82 61.0
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 1.2e-21 106.7 83 55.4
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 1.6e-21 106.3 91 56.0
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 6.1e-21 104.4 85 52.9
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 6.1e-21 104.4 90 54.4
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 1.0e-20 103.6 81 59.3
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 1.0e-20 103.6 89 57.3
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 1.3e-20 103.2 82 58.5
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 1.8e-20 102.8 80 55.0
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 2.3e-20 102.4 70 62.9
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 3.0e-20 102.1 74 58.1
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 3.0e-20 102.1 81 58.0
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 3.9e-20 101.7 83 59.0
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 3.9e-20 101.7 82 54.9
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 3.9e-20 101.7 81 58.0
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 3.9e-20 101.7 85 54.1
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 3.9e-20 101.7 90 53.3
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 3.9e-20 101.7 80 55.0
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 5.1e-20 101.3 90 53.3
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 5.1e-20 101.3 85 55.3
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 5.1e-20 101.3 85 55.3
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 5.1e-20 101.3 85 55.3
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 5.1e-20 101.3 68 64.7
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 6.7e-20 100.9 68 63.2
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 6.7e-20 100.9 90 52.2
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 8.7e-20 100.5 77 55.8
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 1.1e-19 100.1 87 50.6
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.1e-19 100.1 85 54.1
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 1.5e-19 99.8 88 52.3
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 1.5e-19 99.8 85 52.9
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 1.9e-19 99.4 94 53.2
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 1.9e-19 99.4 82 53.7
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 1.9e-19 99.4 78 56.4
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 1.9e-19 99.4 80 57.5
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 1.9e-19 99.4 80 57.5
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 1.9e-19 99.4 87 50.6
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 1.9e-19 99.4 87 50.6
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 1.9e-19 99.4 87 50.6
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 1.9e-19 99.4 84 54.8
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 2.5e-19 99.0 95 55.8
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 2.5e-19 99.0 91 51.6
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 2.5e-19 99.0 85 54.1
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 2.5e-19 99.0 77 57.1
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 2.5e-19 99.0 82 56.1
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 3.3e-19 98.6 78 57.7
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 3.3e-19 98.6 91 52.7
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 4.3e-19 98.2 81 53.1
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 4.3e-19 98.2 81 53.1
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 4.3e-19 98.2 80 52.5
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 4.3e-19 98.2 90 52.2
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 5.7e-19 97.8 80 52.5
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 5.7e-19 97.8 81 51.9
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 5.7e-19 97.8 89 55.1
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 7.4e-19 97.4 89 55.1
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 7.4e-19 97.4 88 52.3
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 7.4e-19 97.4 90 51.1
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 7.4e-19 97.4 79 53.2
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 9.7e-19 97.1 90 50.0
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 9.7e-19 97.1 83 50.6
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 1.3e-18 96.7 80 52.5
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 1.3e-18 96.7 91 51.6
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 1.6e-18 96.3 71 60.6
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 1.6e-18 96.3 71 60.6
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 1.6e-18 96.3 84 52.4
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 1.6e-18 96.3 70 61.4
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.2e-18 95.9 81 51.9
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.2e-18 95.9 81 51.9
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 2.2e-18 95.9 78 53.8
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 2.8e-18 95.5 89 51.7
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 2.8e-18 95.5 93 51.6
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 2.8e-18 95.5 80 51.2
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 2.8e-18 95.5 79 51.9
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 3.7e-18 95.1 66 62.1
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 3.7e-18 95.1 78 55.1
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 3.7e-18 95.1 81 50.6
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 3.7e-18 95.1 80 51.2
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 3.7e-18 95.1 89 53.9
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 4.8e-18 94.7 103 46.6
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 6.3e-18 94.4 86 51.2
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 6.3e-18 94.4 71 53.5
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 6.3e-18 94.4 71 53.5
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 8.2e-18 94.0 81 55.6
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 8.2e-18 94.0 81 50.6
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 8.2e-18 94.0 72 61.1
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 8.2e-18 94.0 75 54.7
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 1.1e-17 93.6 85 50.6
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 1.1e-17 93.6 78 53.8
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 1.4e-17 93.2 85 50.6
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 1.8e-17 92.8 89 48.3
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 1.8e-17 92.8 76 53.9
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 1.8e-17 92.8 73 57.5
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 1.8e-17 92.8 66 62.1
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 2.4e-17 92.4 71 59.2
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.4e-17 92.4 66 62.1
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 3.1e-17 92.0 71 56.3
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 3.1e-17 92.0 75 53.3
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 3.1e-17 92.0 70 58.6
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 5.3e-17 91.3 64 60.9
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 5.3e-17 91.3 70 55.7
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 9.0e-17 90.5 87 47.1
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 1.2e-16 90.1 91 46.2
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 1.5e-16 89.7 72 51.4
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 2.0e-16 89.4 92 47.8
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 2.6e-16 89.0 74 51.4
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 7.7e-16 87.4 81 49.4
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 1.3e-15 86.7 69 56.5
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 1.3e-15 86.7 66 59.1
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 1.7e-15 86.3 61 60.7
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 2.9e-15 85.5 80 51.2
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 6.5e-15 84.3 73 49.3
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 1.1e-14 83.6 61 59.0
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 1.1e-14 83.6 55 65.5
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 2.5e-14 82.4 93 45.2
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 3.2e-14 82.0 70 50.0
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 3.2e-14 82.0 70 50.0
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 9.4e-14 80.5 88 48.9
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 2.7e-13 79.0 68 48.5
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 3.6e-13 78.6 61 52.5
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 6.1e-13 77.8 63 52.4
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 5.1e-12 74.7 80 43.8
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 5.7e-11 71.2 56 48.2
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.3e-10 70.1 56 46.4
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 2.2e-10 69.3 56 50.0
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 4.8e-10 68.2 76 46.1
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.8e-10 68.2 56 44.6
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 1.4e-09 66.6 88 37.5
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.4e-09 65.9 65 46.2
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 3.1e-09 65.5 75 41.3
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 3.1e-09 65.5 56 55.4
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.1e-09 65.1 82 39.0
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 2.0e-08 62.8 114 32.5
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 3.8e-07 58.5 63 38.1
TWI23G0269 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 1.9e-06 56.2 37 64.9


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