Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 5.2e-130 468.0 285 100.0
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 5.2e-106 388.3 210 90.0
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.7e-104 383.3 209 87.6
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.9e-104 381.7 215 84.7
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.4e-104 381.3 210 88.1
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.4e-104 381.3 210 88.1
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 6.4e-104 381.3 210 88.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.9e-103 379.8 215 86.0
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 2.4e-103 379.4 212 87.3
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 3.2e-103 379.0 210 87.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 5.4e-103 378.3 210 88.6
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 5.4e-103 378.3 210 87.1
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 7.0e-103 377.9 210 87.1
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 7.0e-103 377.9 215 86.0
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 7.0e-103 377.9 215 86.0
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 9.2e-103 377.5 210 87.6
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.2e-102 377.1 216 85.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.0e-102 376.3 210 86.7
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 3.5e-102 375.6 212 85.8
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 6.0e-102 374.8 210 86.7
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 7.8e-102 374.4 210 84.8
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.8e-102 374.4 209 87.6
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.8e-102 374.4 209 87.6
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 7.8e-102 374.4 210 86.7
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.3e-101 373.6 209 86.1
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.7e-101 373.2 216 82.9
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 1.7e-101 373.2 212 84.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.3e-101 372.9 216 83.3
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.0e-101 372.5 209 84.7
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.9e-101 372.1 213 85.4
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 6.6e-101 371.3 209 85.6
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.1e-100 370.5 210 86.7
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.9e-100 369.8 210 84.8
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 1.2e-99 367.1 217 82.9
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.6e-99 366.7 210 84.8
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.6e-99 366.7 210 83.8
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.6e-99 366.7 213 84.0
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 2.1e-99 366.3 209 84.7
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 2.8e-99 365.9 210 84.8
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.6e-99 365.5 210 84.3
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 3.6e-99 365.5 216 81.5
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.7e-99 365.2 210 84.3
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 6.2e-99 364.8 209 84.2
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 8.0e-99 364.4 209 83.3
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.4e-98 363.6 238 76.9
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 1.8e-98 363.2 214 81.3
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.8e-98 363.2 209 83.7
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 3.1e-98 362.5 209 82.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 3.1e-98 362.5 209 83.7
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 5.2e-98 361.7 211 83.9
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 5.2e-98 361.7 209 83.7
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 5.2e-98 361.7 209 82.8
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 6.8e-98 361.3 247 74.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 6.8e-98 361.3 213 80.8
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 8.9e-98 360.9 208 83.2
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 2.0e-97 359.8 212 81.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.0e-97 359.8 210 83.8
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.4e-97 358.6 211 81.5
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 4.4e-97 358.6 209 83.3
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 4.4e-97 358.6 209 82.8
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 4.4e-97 358.6 209 82.3
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.8e-97 358.2 210 82.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 5.8e-97 358.2 214 82.2
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 7.5e-97 357.8 215 82.3
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.2e-96 356.3 216 80.6
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 2.9e-96 355.9 213 80.8
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 3.7e-96 355.5 208 82.7
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.9e-96 355.1 214 81.3
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.9e-96 355.1 214 81.3
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.9e-96 355.1 214 81.3
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 4.9e-96 355.1 213 83.1
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.1e-95 354.0 215 80.0
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.1e-95 354.0 209 81.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.1e-95 354.0 213 79.3
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.1e-95 354.0 216 80.6
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.4e-95 353.6 214 80.8
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.9e-95 353.2 209 81.8
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.9e-95 353.2 209 81.8
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.9e-95 353.2 209 81.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.9e-95 353.2 209 81.8
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.4e-95 352.8 213 79.3
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 3.2e-95 352.4 337 59.9
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.2e-95 352.4 212 81.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 7.0e-95 351.3 209 80.9
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 7.0e-95 351.3 209 81.3
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 9.2e-95 350.9 209 80.9
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 9.2e-95 350.9 209 81.8
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.2e-94 350.5 209 81.3
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 2.1e-94 349.7 209 81.3
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 2.7e-94 349.4 209 80.4
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.3e-93 347.1 216 77.3
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 2.3e-93 346.3 195 85.6
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 3.3e-92 342.4 292 63.0
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 8.1e-91 337.8 187 85.6
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 2.9e-88 329.3 205 77.6
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 2.9e-88 329.3 205 77.6
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.4e-87 326.2 208 76.0
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 5.6e-84 315.1 209 73.7
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.5e-78 295.8 199 75.4
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 3.1e-74 282.7 216 62.5
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 3.1e-74 282.7 209 67.5
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 4.4e-73 278.9 201 63.2
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.4e-71 273.9 202 64.4
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.2e-71 272.7 218 67.4
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.6e-70 270.4 224 65.6
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.6e-67 260.4 150 81.3
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.4e-66 257.3 188 67.0
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.9e-64 248.8 141 82.3
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 5.1e-37 159.1 238 44.1
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.7e-35 154.1 176 52.8
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.5e-33 147.5 92 81.5
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 3.2e-31 139.8 120 52.5
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 4.2e-31 139.4 151 46.4
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 6.1e-30 135.6 161 44.1
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.8e-27 126.7 93 72.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 7.0e-26 122.1 66 83.3
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 2.9e-24 116.7 131 45.0
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.2e-08 63.9 80 43.8


User provided reference genes

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