Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 3.4e-62 241.5 122 100.0
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.9e-20 102.8 99 50.5
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 2.4e-20 102.4 99 50.5
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 2.4e-20 102.4 99 50.5
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 2.4e-20 102.4 99 50.5
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 2.1e-19 99.4 105 44.8
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 2.7e-19 99.0 123 47.2
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 3.5e-19 98.6 113 46.9
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 3.9e-18 95.1 112 42.9
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 8.7e-18 94.0 87 46.0
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 1.1e-17 93.6 119 42.0
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 1.5e-17 93.2 104 45.2
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 1.5e-17 93.2 104 42.3
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 1.9e-17 92.8 80 51.2
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.3e-16 90.1 77 53.2
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 2.1e-16 89.4 76 50.0
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 3.6e-16 88.6 80 46.2
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 8.1e-16 87.4 76 48.7
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 1.1e-15 87.0 79 48.1
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 1.8e-15 86.3 79 46.8
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 1.8e-15 86.3 79 48.1
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 5.3e-15 84.7 76 47.4
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 5.3e-15 84.7 76 47.4
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 1.2e-14 83.6 79 46.8
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 1.2e-14 83.6 80 42.5
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 1.5e-14 83.2 83 48.2
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 2.6e-14 82.4 93 43.0
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 3.4e-14 82.0 70 54.3
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 3.4e-14 82.0 70 54.3
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 3.4e-14 82.0 68 52.9
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 5.8e-14 81.3 69 52.2
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 7.6e-14 80.9 105 40.0
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 7.6e-14 80.9 68 50.0
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.7e-13 79.7 111 36.0
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 1.7e-13 79.7 87 44.8
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 2.2e-13 79.3 85 40.0
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 3.8e-13 78.6 94 38.3
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 3.8e-13 78.6 79 40.5
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 3.8e-13 78.6 76 46.1
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 8.4e-13 77.4 88 44.3
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.1e-12 77.0 79 40.5
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 2.4e-12 75.9 103 39.8
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 4.2e-12 75.1 97 37.1
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 9.3e-12 73.9 86 41.9
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 9.3e-12 73.9 86 41.9
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 1.6e-11 73.2 74 40.5
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 1.6e-11 73.2 66 50.0
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 2.7e-11 72.4 79 45.6
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 3.5e-11 72.0 77 39.0
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 4.6e-11 71.6 73 45.2
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 6.0e-11 71.2 87 41.4
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 1.0e-10 70.5 73 45.2
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 1.8e-10 69.7 72 45.8
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 5.1e-10 68.2 67 46.3
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 6.7e-10 67.8 76 40.8
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 8.7e-10 67.4 87 33.3
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 2.5e-09 65.9 103 34.0
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 7.4e-09 64.3 58 53.4
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 9.6e-09 63.9 92 33.7
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 2.8e-08 62.4 79 38.0
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 1.4e-07 60.1 86 37.2
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 5.3e-07 58.2 56 46.4
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 5.3e-07 58.2 63 46.0
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 5.3e-07 58.2 63 46.0
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 6.9e-07 57.8 47 55.3
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 6.9e-07 57.8 47 53.2
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 1.2e-06 57.0 66 45.5
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 1.5e-06 56.6 47 55.3
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 1.5e-06 56.6 85 36.5
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 2.0e-06 56.2 43 53.5
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 5.8e-06 54.7 47 51.1
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 5.8e-06 54.7 36 55.6


User provided reference genes

Program Settings