Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 7.3e-105 384.0 212 100.0
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 4.9e-69 265.0 213 68.5
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 3.5e-67 258.8 213 68.1
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 1.5e-65 253.4 212 68.4
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 7.4e-65 251.1 213 64.8
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 1.8e-63 246.5 213 64.8
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 2.4e-63 246.1 213 64.3
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 1.4e-60 236.9 212 60.8
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.9e-60 236.5 212 62.3
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.5e-60 235.0 213 60.6
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 9.3e-60 234.2 213 60.6
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 6.1e-59 231.5 213 60.6
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.3e-58 229.6 212 59.9
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 3.9e-58 228.8 213 59.6
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 5.7e-57 224.9 213 58.7
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 1.6e-56 223.4 211 59.2
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 6.3e-56 221.5 210 57.1
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 8.2e-56 221.1 209 58.4
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 1.8e-55 219.9 211 55.5
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 3.1e-55 219.2 210 57.1
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 6.9e-55 218.0 222 59.0
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 9.0e-55 217.6 217 58.1
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.2e-54 217.2 212 61.8
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.2e-54 217.2 212 57.5
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 7.7e-54 214.5 211 57.8
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 7.7e-54 214.5 212 56.6
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.3e-53 213.8 211 57.8
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.9e-53 212.6 208 55.8
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 1.4e-52 210.3 218 55.0
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 1.9e-52 209.9 208 57.2
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.5e-52 209.5 213 54.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 2.5e-52 209.5 209 54.5
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 3.2e-52 209.1 211 56.9
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 5.5e-52 208.4 199 59.8
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 7.2e-52 208.0 211 60.2
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 9.4e-52 207.6 210 59.5
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.2e-51 207.2 213 55.9
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.2e-51 207.2 211 58.3
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 2.1e-51 206.5 211 56.9
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 3.6e-51 205.7 212 56.1
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 3.6e-51 205.7 211 55.9
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 1.4e-50 203.8 212 54.7
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 3.0e-50 202.6 211 54.5
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 8.8e-50 201.1 214 54.2
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 8.8e-50 201.1 211 51.7
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 1.5e-49 200.3 213 55.4
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 2.0e-49 199.9 210 52.4
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 3.3e-49 199.1 210 53.3
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 7.4e-49 198.0 205 52.2
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.7e-48 196.8 203 57.6
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 4.8e-48 195.3 213 54.0
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 6.3e-48 194.9 182 59.3
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.4e-47 193.0 210 52.4
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 4.1e-47 192.2 210 51.4
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 4.1e-47 192.2 210 51.4
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 9.1e-47 191.0 208 54.8
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 1.2e-46 190.7 197 53.3
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 1.5e-46 190.3 213 52.6
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 1.5e-46 190.3 210 51.0
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.5e-46 190.3 215 52.1
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 7.7e-46 188.0 210 50.5
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.3e-45 187.2 209 49.8
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 1.7e-45 186.8 208 53.4
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.2e-45 186.4 212 50.0
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 5.0e-45 185.3 208 51.4
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 6.5e-45 184.9 212 50.0
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 1.4e-44 183.7 212 50.0
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.4e-44 183.7 214 52.3
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 3.2e-44 182.6 212 49.5
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 4.2e-44 182.2 213 48.4
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 5.5e-44 181.8 209 49.8
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 7.2e-44 181.4 209 49.8
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 9.4e-44 181.0 208 51.9
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 2.1e-43 179.9 217 47.5
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.1e-43 179.9 211 51.2
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 2.1e-43 179.9 213 51.6
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 1.0e-42 177.6 209 48.8
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.8e-42 176.8 209 47.4
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 3.0e-42 176.0 209 48.3
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 1.1e-41 174.1 208 50.0
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.6e-41 172.9 211 50.7
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 3.3e-41 172.6 210 47.1
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 3.3e-41 172.6 211 50.2
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 4.4e-41 172.2 208 48.6
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 4.4e-41 172.2 211 49.8
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 9.7e-41 171.0 211 50.2
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 2.2e-40 169.9 211 46.4
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 3.7e-40 169.1 203 46.3
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 3.1e-39 166.0 220 46.8
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 7.0e-39 164.9 211 45.5
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 3.5e-38 162.5 212 48.1
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 5.9e-38 161.8 210 44.8
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.9e-38 161.8 211 47.9
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 7.7e-38 161.4 212 43.9
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.7e-37 160.2 208 45.2
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 1.7e-37 160.2 213 46.9
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 5.0e-37 158.7 214 44.9
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 1.1e-36 157.5 198 47.5
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 1.5e-36 157.1 211 43.6
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 2.5e-36 156.4 211 46.0
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 3.2e-36 156.0 211 44.5
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 4.2e-36 155.6 211 47.4
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 5.5e-36 155.2 205 44.4
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 1.2e-35 154.1 210 47.1
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 1.2e-35 154.1 163 55.2
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 8.0e-35 151.4 214 43.0
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 5.2e-34 148.7 218 43.6
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.1e-33 147.5 190 47.4
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 3.3e-33 146.0 195 46.7
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 5.7e-33 145.2 204 42.6
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 5.7e-33 145.2 214 44.4
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.2e-32 143.3 214 39.3
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.1e-31 141.0 213 40.8
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 2.4e-31 139.8 206 41.7
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 2.4e-31 139.8 216 38.9
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.1e-31 139.4 220 43.2
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 1.2e-30 137.5 199 41.2
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.6e-30 137.1 219 41.1
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.7e-30 136.3 212 40.1
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 5.9e-30 135.2 205 40.0
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.0e-29 134.4 212 39.2
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 1.3e-29 134.0 200 39.5
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 8.5e-29 131.3 196 42.9
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 1.1e-28 131.0 211 37.9
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.9e-28 130.2 199 42.2
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 3.2e-28 129.4 206 39.8
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 4.2e-28 129.0 196 42.3
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 4.2e-28 129.0 198 40.9
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 5.5e-28 128.6 196 41.8
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 5.5e-28 128.6 196 41.8
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 5.5e-28 128.6 208 38.9
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 2.7e-27 126.3 214 41.1
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 8.0e-27 124.8 214 41.1
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 1.0e-26 124.4 216 38.0
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 3.0e-26 122.9 196 40.8
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 4.0e-26 122.5 142 52.1
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 5.2e-26 122.1 190 41.6
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.2e-26 122.1 140 52.9
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 6.8e-26 121.7 204 40.2
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.4e-25 119.4 218 40.4
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 2.8e-24 116.3 213 42.3
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.8e-24 115.5 140 52.1
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 1.8e-23 113.6 150 42.0
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 3.1e-23 112.8 177 39.0
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 3.5e-22 109.4 216 38.4
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 1.3e-21 107.5 214 37.4
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.1e-20 104.4 138 46.4
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 1.1e-20 104.4 115 51.3
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.2e-19 100.9 215 36.7
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 4.4e-17 92.4 204 36.8
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.4e-15 87.4 118 42.4
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 1.0e-10 71.2 83 53.0
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 1.4e-07 60.8 87 39.1


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