Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 3.6e-43 177.9 95 100.0
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 2.1e-19 99.0 80 62.5
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 3.0e-18 95.1 70 68.6
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 7.5e-17 90.5 71 63.4
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 1.7e-16 89.4 93 51.6
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 2.2e-16 89.0 77 59.7
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 2.2e-16 89.0 77 58.4
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 6.3e-16 87.4 79 59.5
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 1.1e-15 86.7 93 54.8
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 2.4e-15 85.5 91 52.7
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 3.1e-15 85.1 90 52.2
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 4.1e-15 84.7 71 60.6
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 4.1e-15 84.7 65 63.1
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 4.1e-15 84.7 68 61.8
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 5.4e-15 84.3 93 48.4
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 9.1e-15 83.6 76 55.3
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 9.1e-15 83.6 93 50.5
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 9.1e-15 83.6 81 55.6
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 9.1e-15 83.6 81 55.6
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 9.1e-15 83.6 77 58.4
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 1.2e-14 83.2 68 58.8
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 1.2e-14 83.2 77 57.1
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 1.2e-14 83.2 78 55.1
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 1.6e-14 82.8 93 51.6
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 1.6e-14 82.8 92 50.0
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 2.0e-14 82.4 68 61.8
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 3.5e-14 81.6 87 49.4
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 4.5e-14 81.3 80 51.2
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 4.5e-14 81.3 88 54.5
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 7.7e-14 80.5 93 48.4
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 7.7e-14 80.5 93 52.7
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 7.7e-14 80.5 94 47.9
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 1.7e-13 79.3 71 57.7
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 2.9e-13 78.6 71 54.9
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 5.0e-13 77.8 71 53.5
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 6.5e-13 77.4 83 48.2
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 6.5e-13 77.4 68 57.4
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 8.6e-13 77.0 66 57.6
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 1.1e-12 76.6 93 51.6
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 1.5e-12 76.3 71 53.5
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 1.5e-12 76.3 91 47.3
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 1.5e-12 76.3 94 48.9
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 1.5e-12 76.3 91 47.3
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 2.5e-12 75.5 66 56.1
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 3.2e-12 75.1 91 48.4
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.2e-12 74.7 69 53.6
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 4.2e-12 74.7 88 48.9
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 5.5e-12 74.3 68 54.4
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 7.2e-12 73.9 72 56.9
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 9.5e-12 73.6 83 45.8
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 9.5e-12 73.6 106 43.4
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 9.5e-12 73.6 106 43.4
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 2.1e-11 72.4 71 49.3
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 2.1e-11 72.4 71 50.7
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 2.8e-11 72.0 83 44.6
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 2.8e-11 72.0 83 44.6
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 2.8e-11 72.0 71 50.7
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 2.8e-11 72.0 79 50.6
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 3.6e-11 71.6 69 53.6
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 4.7e-11 71.2 68 54.4
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 6.1e-11 70.9 83 44.6
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 6.1e-11 70.9 68 52.9
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 8.0e-11 70.5 66 51.5
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 1.0e-10 70.1 83 43.4
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 1.4e-10 69.7 65 55.4
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 1.8e-10 69.3 71 49.3
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 3.0e-10 68.6 83 48.2
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 8.8e-10 67.0 66 47.0
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 8.8e-10 67.0 73 47.9
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 8.8e-10 67.0 71 49.3
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 1.2e-09 66.6 83 43.4
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.5e-09 66.2 71 49.3
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 1.5e-09 66.2 79 46.8
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 2.6e-09 65.5 106 39.6
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 4.4e-09 64.7 63 54.0
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 9.8e-09 63.5 67 49.3
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.3e-08 63.2 68 48.5
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 2.8e-08 62.0 70 47.1
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 6.3e-08 60.8 77 44.2
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 6.3e-08 60.8 69 46.4
SEGI_40405 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 1.4e-07 59.7 69 46.4
Glyma.14G183300 Glycine max HOM05D007802 ORTHO05D009879 2.4e-07 58.9 45 60.0
BcaC02g07465 Brassica carinata HOM05D007802 ORTHO05D009879 1.6e-06 56.2 66 47.0


User provided reference genes

Program Settings