Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 5.9e-197 690.6 341 100.0
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.6e-59 233.4 351 42.5
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 5.7e-59 232.3 354 41.2
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 4.8e-58 229.2 350 42.6
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 3.8e-55 219.5 361 41.3
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 9.4e-54 214.9 360 40.3
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 8.0e-53 211.8 357 39.2
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.0e-52 209.5 357 39.2
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.5e-51 207.6 354 37.0
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 3.5e-48 196.4 334 38.3
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 5.0e-47 192.6 375 36.3
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.5e-47 192.2 380 35.5
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 1.5e-46 191.0 377 34.7
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.9e-46 190.7 362 37.8
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.6e-45 186.4 348 38.2
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-42 177.9 365 33.4
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.3e-42 177.9 352 37.2
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 5.4e-41 172.6 357 35.6
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.6e-40 171.0 385 34.3
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.7e-39 167.5 378 34.1
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.7e-39 167.5 346 35.5
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 7.3e-38 162.2 283 38.5
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 4.7e-37 159.5 377 32.6
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.0e-36 158.3 356 34.0
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 8.9e-36 155.2 366 35.0
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.2e-35 154.8 373 31.4
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 5.7e-35 152.5 284 35.2
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.7e-35 152.5 367 33.2
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 3.7e-34 149.8 364 32.1
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 3.7e-34 149.8 364 32.1
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.8e-33 147.5 347 31.4
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.4e-33 146.0 368 34.2
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 1.6e-32 144.4 353 30.3
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 5.9e-32 142.5 366 31.7
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.0e-31 141.7 344 33.1
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 5.0e-31 139.4 365 30.4
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 8.6e-31 138.7 365 31.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.3e-30 136.7 354 32.5
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 4.3e-30 136.3 351 32.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.2e-29 134.8 340 31.5
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.4e-28 131.3 360 30.3
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 8.9e-28 128.6 402 28.4
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-27 128.3 383 30.0
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.5e-27 127.9 341 29.6
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 2.0e-27 127.5 361 32.1
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.3e-26 124.8 351 31.1
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.9e-25 120.9 353 28.6
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 3.2e-25 120.2 346 29.2
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 4.1e-25 119.8 362 30.4
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-24 118.2 349 28.1
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 2.0e-24 117.5 374 27.8
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 3.5e-24 116.7 373 30.3
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 6.0e-24 115.9 350 29.1
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.3e-23 114.8 350 30.3
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.7e-23 114.4 319 28.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.6e-23 112.1 345 28.1
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 4.3e-22 109.8 349 29.2
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.6e-21 107.8 390 27.4
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 3.6e-21 106.7 386 28.0
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 8.1e-21 105.5 359 28.1
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.1e-20 105.1 347 29.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.4e-20 104.8 387 28.2
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.2e-19 101.7 364 27.5
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.5e-19 101.3 366 27.6
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.5e-19 101.3 356 27.5
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.4e-19 100.1 341 27.0
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 5.8e-19 99.4 338 29.6
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 7.5e-19 99.0 341 26.7
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 7.5e-19 99.0 341 26.7
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 9.9e-19 98.6 198 34.3
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.3e-18 98.2 337 27.3
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.9e-18 97.1 367 26.2
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.3e-18 95.5 197 31.5
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.1e-17 95.1 368 27.7
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 3.2e-17 93.6 362 26.8
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.2e-17 93.6 373 27.3
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 7.1e-17 92.4 344 25.6
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.2e-16 91.7 355 26.5
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 2.1e-16 90.9 385 26.8
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.1e-16 90.9 134 35.8
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 2.7e-16 90.5 353 27.8
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 6.0e-16 89.4 355 26.8
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 7.8e-16 89.0 359 27.9
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 1.0e-15 88.6 360 25.8
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.3e-15 88.2 344 27.9
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 2.3e-15 87.4 116 38.8
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.1e-15 86.3 134 36.6
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 6.6e-15 85.9 336 25.3
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.1e-14 85.1 156 35.3
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 1.1e-14 85.1 365 26.8
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 3.3e-14 83.6 160 38.8
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.3e-14 82.4 338 27.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.3e-14 82.4 344 27.9
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 7.3e-14 82.4 347 28.0
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.8e-12 77.8 344 28.2
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 5.2e-12 76.3 369 26.8
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 6.8e-12 75.9 356 25.8
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.2e-11 75.1 356 24.4
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.0e-11 74.3 353 26.1
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.6e-11 73.9 346 24.3
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.6e-11 73.9 362 25.1
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 7.6e-11 72.4 350 25.7
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 1.7e-10 71.2 137 35.8
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.7e-10 71.2 338 23.1
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.7e-10 71.2 348 27.0
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.7e-10 71.2 348 27.0
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 2.2e-10 70.9 356 27.2
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 3.8e-10 70.1 351 25.4
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 7.1e-09 65.9 341 23.5
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 7.1e-09 65.9 352 23.6
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.5e-08 63.5 107 37.4
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.5e-08 63.5 85 41.2
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 6.0e-08 62.8 112 30.4
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 6.6e-07 59.3 128 33.6
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 9.6e-06 55.5 219 25.6


User provided reference genes

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