Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 1.8e-57 225.7 112 100.0
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 3.9e-33 144.8 117 59.8
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 7.4e-32 140.6 113 60.2
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 1.7e-31 139.4 112 59.8
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.1e-30 136.7 115 58.3
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 4.1e-30 134.8 112 58.0
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 9.1e-30 133.7 112 58.0
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 1.2e-29 133.3 112 53.6
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 2.0e-29 132.5 112 53.6
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 3.4e-29 131.7 112 51.8
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 3.4e-29 131.7 110 58.2
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 4.5e-29 131.3 112 53.6
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 4.5e-29 131.3 112 56.2
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 7.7e-29 130.6 112 55.4
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 1.0e-28 130.2 111 55.9
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 1.0e-28 130.2 112 54.5
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 1.7e-28 129.4 112 51.8
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 1.7e-28 129.4 112 55.4
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 2.2e-28 129.0 112 54.5
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 2.9e-28 128.6 112 52.7
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 1.1e-27 126.7 112 53.6
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 1.1e-27 126.7 110 52.7
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 1.4e-27 126.3 112 51.8
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 3.2e-27 125.2 110 52.7
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 4.2e-27 124.8 112 50.9
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 5.5e-27 124.4 110 49.1
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 52.7
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 50.9
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 50.9
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 5.5e-27 124.4 112 52.7
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 7.2e-27 124.0 110 58.2
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 9.4e-27 123.6 111 51.4
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 1.2e-26 123.2 111 51.4
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 2.7e-26 122.1 112 54.5
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 2.7e-26 122.1 111 49.5
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 3.6e-26 121.7 112 50.9
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 3.6e-26 121.7 112 49.1
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 3.6e-26 121.7 112 51.8
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 4.7e-26 121.3 112 50.9
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 4.7e-26 121.3 112 55.4
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 4.7e-26 121.3 112 50.9
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 4.7e-26 121.3 108 54.6
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 6.1e-26 120.9 112 50.9
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 8.0e-26 120.6 106 51.9
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 1.0e-25 120.2 109 53.2
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 1.0e-25 120.2 109 52.3
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 1.4e-25 119.8 112 52.7
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 1.4e-25 119.8 112 50.0
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 1.4e-25 119.8 112 54.5
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 2.3e-25 119.0 110 49.1
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 2.3e-25 119.0 109 48.6
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 5.2e-25 117.9 112 51.8
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 5.2e-25 117.9 114 49.1
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 5.2e-25 117.9 110 51.8
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 2.0e-24 115.9 110 46.4
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 2.6e-24 115.5 112 50.0
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 2.6e-24 115.5 108 47.2
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 5.7e-24 114.4 109 49.5
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 5.7e-24 114.4 109 49.5
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 5.7e-24 114.4 110 51.8
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 7.4e-24 114.0 112 48.2
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 1.7e-23 112.8 110 47.3
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 2.2e-23 112.5 112 47.3
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 2.2e-23 112.5 112 48.2
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 2.8e-23 112.1 110 44.5
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 2.8e-23 112.1 110 44.5
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 2.8e-23 112.1 110 48.2
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 2.8e-23 112.1 106 53.8
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 4.8e-23 111.3 110 44.5
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 8.2e-23 110.5 110 45.5
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 8.2e-23 110.5 109 48.6
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 8.2e-23 110.5 109 48.6
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 1.1e-22 110.2 110 49.1
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 1.4e-22 109.8 110 45.5
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 1.8e-22 109.4 101 53.5
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 3.1e-22 108.6 112 47.3
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 4.1e-22 108.2 110 45.5
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 1.6e-21 106.3 110 43.6
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 2.0e-21 105.9 97 47.4
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 2.6e-21 105.5 109 48.6
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 3.5e-21 105.1 112 44.6
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 5.9e-21 104.4 113 46.0
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 7.7e-21 104.0 112 44.6
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 7.7e-21 104.0 99 54.5
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 1.3e-20 103.2 113 46.9
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 3.8e-20 101.7 110 49.1
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 1.2e-18 96.7 81 58.0
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 1.0e-17 93.6 76 57.9
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 1.5e-16 89.7 67 50.7
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 4.4e-16 88.2 70 58.6
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 5.7e-16 87.8 75 58.7
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 1.3e-15 86.7 82 51.2
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 1.7e-15 86.3 68 55.9
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 1.7e-12 76.3 89 49.4
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 1.2e-10 70.1 80 41.2
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 3.0e-09 65.5 100 37.0
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 1.7e-07 59.7 56 51.8
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 1.7e-07 59.7 56 51.8
AUR62038525 Chenopodium quinoa HOM05D007557 ORTHO05D000493 1.8e-06 56.2 38 57.9


User provided reference genes

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