Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.9e-53 212.2 106 100.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 4.7e-44 181.0 100 88.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.8e-43 179.1 102 85.3
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 8.8e-43 176.8 102 84.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 4.9e-41 171.0 100 83.0
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 8.3e-41 170.2 104 81.7
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.1e-40 169.9 102 78.4
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.1e-40 167.9 104 79.8
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.1e-40 167.9 104 79.8
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.7e-39 165.2 104 80.8
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.7e-39 165.2 104 80.8
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.8e-36 155.2 96 79.2
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 6.1e-36 154.1 102 74.5
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.4e-35 152.9 95 78.9
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 6.8e-35 150.6 101 74.3
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 6.8e-35 150.6 98 77.6
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 8.9e-35 150.2 98 76.5
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.2e-34 149.8 99 75.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.0e-34 149.1 101 73.3
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.0e-34 149.1 98 76.5
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.6e-34 148.7 104 72.1
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.6e-34 148.7 103 70.9
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.6e-34 148.7 103 70.9
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.6e-34 148.7 103 70.9
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 3.4e-34 148.3 96 76.0
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 3.4e-34 148.3 96 75.0
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 3.4e-34 148.3 100 74.0
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 4.4e-34 147.9 98 73.5
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 4.4e-34 147.9 96 76.0
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 5.7e-34 147.5 90 80.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 5.7e-34 147.5 96 75.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 7.5e-34 147.1 101 73.3
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 7.5e-34 147.1 98 76.5
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 7.5e-34 147.1 90 78.9
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 9.8e-34 146.7 98 73.5
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.3e-33 146.4 98 73.5
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.3e-33 146.4 99 74.7
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.3e-33 146.4 99 74.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.3e-33 146.4 81 87.7
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.7e-33 146.0 101 72.3
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.7e-33 146.0 99 74.7
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.7e-33 146.0 101 72.3
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.7e-33 146.0 107 67.3
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.2e-33 145.6 101 71.3
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.2e-33 145.6 105 69.5
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.2e-33 145.6 99 73.7
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.7e-33 144.8 96 74.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 3.7e-33 144.8 96 74.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 3.7e-33 144.8 96 76.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 3.7e-33 144.8 98 74.5
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 3.7e-33 144.8 96 74.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 3.7e-33 144.8 99 74.7
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 4.9e-33 144.4 95 73.7
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 4.9e-33 144.4 92 73.9
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.9e-33 144.4 99 74.7
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.9e-33 144.4 99 74.7
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.9e-33 144.4 99 74.7
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 4.9e-33 144.4 96 74.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 6.4e-33 144.1 95 75.8
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 8.3e-33 143.7 89 78.7
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 8.3e-33 143.7 96 72.9
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 8.3e-33 143.7 92 70.7
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 8.3e-33 143.7 98 68.4
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.1e-32 143.3 108 69.4
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.1e-32 143.3 98 69.4
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.8e-32 142.5 96 71.9
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.4e-32 142.1 96 72.9
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 4.1e-32 141.4 106 68.9
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 5.4e-32 141.0 92 77.2
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 9.2e-32 140.2 106 67.0
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.6e-31 139.4 99 70.7
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.0e-31 139.0 96 71.9
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 2.7e-31 138.7 96 69.8
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 2.7e-31 138.7 96 69.8
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.7e-31 138.7 86 80.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.6e-31 137.9 99 68.7
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 5.9e-31 137.5 88 75.0
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.0e-30 136.7 97 67.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.7e-30 136.0 96 71.9
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 3.0e-30 135.2 100 70.0
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.0e-30 135.2 96 70.8
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 3.9e-30 134.8 96 68.8
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 5.0e-30 134.4 96 70.8
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 5.0e-30 134.4 90 72.2
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.0e-30 134.4 102 64.7
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.5e-29 132.9 95 71.6
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.8e-28 128.6 130 54.6
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.2e-28 127.5 87 70.1
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 8.0e-28 127.1 87 71.3
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.8e-27 125.9 84 76.2
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 3.1e-27 125.2 87 70.1
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 8.9e-27 123.6 83 74.7
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 8.9e-27 123.6 96 61.5
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 9.8e-26 120.2 106 55.7
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.3e-25 119.8 88 71.6
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.7e-25 119.4 87 65.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.7e-25 118.2 88 68.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 6.4e-25 117.5 88 69.3
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 8.3e-25 117.1 94 63.8
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.9e-24 115.9 87 65.5
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 2.7e-23 112.1 94 57.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.9e-22 108.2 77 71.4
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.6e-22 107.5 77 70.1
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 5.6e-21 104.4 93 52.7
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 9.5e-21 103.6 74 64.9
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 1.6e-20 102.8 87 62.1
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 3.4e-18 95.1 92 45.7
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.7e-17 92.8 57 77.2
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.9e-17 92.0 83 57.8
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 5.4e-16 87.8 66 66.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 9.2e-16 87.0 58 72.4
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.1e-13 80.1 46 84.8
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 8.9e-11 70.5 53 69.8
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.3e-09 66.6 48 68.8
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.9e-08 62.8 50 60.0
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 2.1e-07 59.3 45 62.2


User provided reference genes

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