Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 0.0e+00 1350.1 785 100.0
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.4e-161 574.3 797 51.6
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 9.5e-142 508.4 827 45.9
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.2e-139 501.5 828 46.1
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.6e-139 500.4 575 55.1
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 1.1e-137 495.0 808 45.0
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 4.6e-136 489.6 808 47.6
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 6.0e-136 489.2 797 44.7
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 2.0e-131 474.2 814 44.5
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 1.3e-130 471.5 795 44.7
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 2.2e-130 470.7 815 45.3
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 2.2e-130 470.7 826 49.0
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 6.2e-125 452.6 765 42.7
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.4e-124 451.4 828 42.0
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.8e-124 451.1 610 49.5
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.3e-122 444.9 911 39.5
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 5.1e-119 433.0 901 40.0
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 5.1e-119 433.0 797 43.0
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 6.6e-119 432.6 868 40.0
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 8.7e-119 432.2 812 40.5
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.1e-116 425.2 586 48.6
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 2.4e-116 424.1 801 42.2
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 4.0e-116 423.3 797 42.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 3.4e-115 420.2 826 41.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 1.7e-114 417.9 584 46.2
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 2.4e-113 414.1 815 41.8
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 6.0e-112 409.5 816 42.0
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 7.8e-112 409.1 803 41.2
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 3.9e-111 406.8 842 38.7
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 5.6e-110 402.9 583 44.9
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 2.1e-109 401.0 816 41.2
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 3.6e-109 400.2 576 46.2
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 9.0e-108 395.6 791 41.8
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 2.0e-107 394.4 570 46.8
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 1.9e-105 387.9 851 39.8
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.8e-103 381.3 802 40.3
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 5.1e-103 379.8 786 41.6
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 4.3e-102 376.7 664 44.4
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.3e-101 375.2 814 44.8
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 2.8e-101 374.0 809 40.4
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 3.7e-101 373.6 622 43.2
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 5.8e-99 366.3 890 37.1
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 7.6e-99 365.9 845 37.5
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 2.9e-98 364.0 449 51.2
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 6.4e-98 362.8 668 41.0
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 2.4e-97 360.9 792 39.4
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 4.2e-97 360.1 609 42.7
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 2.1e-96 357.8 818 39.7
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 3.5e-96 357.1 836 40.9
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 7.9e-96 355.9 803 39.1
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 4.8e-93 346.7 538 46.7
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 1.1e-92 345.5 798 39.8
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.1e-92 345.5 838 36.6
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 1.4e-92 345.1 568 44.0
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.4e-92 344.4 874 35.6
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 5.3e-92 343.2 796 39.4
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.6e-91 340.9 801 39.7
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 4.9e-90 336.7 786 42.6
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 6.5e-90 336.3 818 38.4
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 5.5e-89 333.2 614 41.9
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.6e-88 331.6 790 42.0
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 6.0e-88 329.7 815 39.0
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 6.0e-88 329.7 804 40.0
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 6.7e-87 326.2 802 36.4
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 8.7e-87 325.9 574 43.2
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.5e-86 325.1 836 39.7
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 2.5e-86 324.3 821 41.8
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 2.5e-86 324.3 804 40.4
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 3.3e-86 323.9 564 43.3
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.3e-85 322.0 556 43.2
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 2.4e-84 317.8 540 43.7
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 3.1e-84 317.4 560 44.1
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 3.1e-84 317.4 560 44.1
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.5e-83 315.1 580 42.4
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.2e-80 305.4 564 42.2
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.2e-77 294.7 567 41.1
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 4.1e-76 290.4 450 44.0
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 5.0e-74 283.5 289 58.1
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 5.1e-71 273.5 736 35.7
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 5.1e-71 273.5 802 35.7
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.9e-65 255.0 743 33.8
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 2.5e-65 254.6 588 38.1
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 3.2e-65 254.2 723 34.6
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.8e-63 248.4 616 36.9
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.1e-62 245.7 585 36.8
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 2.8e-61 241.1 619 35.2
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 8.2e-61 239.6 810 32.2
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.8e-60 238.4 571 34.3
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 2.4e-60 238.0 591 36.5
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 4.5e-59 233.8 585 36.6
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 5.9e-59 233.4 595 37.1
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.3e-58 232.3 592 35.8
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 5.5e-57 226.9 461 39.5
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 9.4e-57 226.1 591 36.2
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 9.4e-57 226.1 591 36.2
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 3.6e-56 224.2 593 34.6
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 3.6e-56 224.2 602 35.4
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 6.7e-55 219.9 849 32.6
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 9.7e-54 216.1 594 36.2
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.9e-50 204.5 400 38.0
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.4e-47 195.7 565 36.3
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.8e-45 187.2 570 32.6
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 5.4e-44 183.7 439 40.1
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 2.7e-43 181.4 565 32.2
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 2.5e-41 174.9 304 41.4
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 2.3e-39 168.3 320 41.2
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 6.1e-32 143.7 622 29.4
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 3.4e-30 137.9 501 34.5
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 7.0e-28 130.2 199 49.2
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 9.2e-28 129.8 334 33.8
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 3.3e-25 121.3 585 26.7
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 3.3e-25 121.3 585 26.7
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.7e-18 99.0 163 42.3
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.3e-18 98.6 148 47.3
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.4e-12 79.3 128 42.2
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 4.1e-12 77.8 68 61.8
Oeu016743.1 Olea europaea HOM05D002134 ORTHO05D008658 1.6e-08 65.9 94 43.6


User provided reference genes

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