Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 0.0e+00 1481.5 748 100.0
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 7.4e-128 462.2 795 41.1
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 3.5e-117 426.8 807 38.2
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 5.0e-116 422.9 802 39.7
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.6e-114 417.9 802 39.5
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 3.5e-109 400.2 777 39.0
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 6.5e-108 396.0 794 38.7
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 2.3e-105 387.5 794 37.5
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 5.2e-105 386.3 786 37.8
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.3e-103 381.7 772 38.7
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.5e-101 373.6 787 36.7
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.5e-99 368.2 794 37.9
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 4.7e-98 363.2 765 36.2
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 3.0e-92 344.0 707 39.0
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 3.1e-89 334.0 704 38.2
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.9e-83 314.7 788 33.9
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.2e-80 305.4 795 34.1
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 1.3e-76 292.0 895 32.1
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 5.1e-76 290.0 882 32.9
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 2.1e-74 284.6 770 31.8
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 3.6e-74 283.9 805 32.3
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 2.2e-71 274.6 819 31.3
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 3.8e-71 273.9 911 31.1
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.1e-70 272.3 831 30.0
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.0e-68 265.8 811 31.8
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.3e-68 265.4 760 32.1
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 2.3e-68 264.6 991 29.2
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 5.1e-68 263.5 771 32.0
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 5.6e-67 260.0 746 32.4
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 3.6e-66 257.3 863 31.7
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 5.2e-65 253.4 802 31.3
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-64 252.3 868 31.6
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-64 251.9 869 31.1
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 4.4e-64 250.4 820 31.6
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 1.4e-62 245.4 919 29.3
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.4e-62 244.6 807 30.5
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.2e-62 244.2 806 31.3
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 5.4e-62 243.4 194 67.5
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.2e-61 242.3 794 30.1
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 1.3e-60 238.8 960 27.8
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.3e-60 238.0 824 31.3
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 5.1e-60 236.9 777 32.3
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.5e-59 234.6 809 30.8
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 5.6e-59 233.4 886 27.9
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 9.6e-59 232.6 857 28.9
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 9.6e-59 232.6 995 28.8
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 4.5e-56 223.8 436 37.2
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 7.6e-56 223.0 811 30.6
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.3e-55 222.2 786 29.0
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 4.2e-54 217.2 778 29.8
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.3e-52 212.2 254 49.2
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 3.0e-52 211.1 798 29.9
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 6.7e-52 209.9 859 29.5
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 1.1e-51 209.1 800 29.4
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.1e-51 209.1 221 54.3
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.1e-51 209.1 836 31.0
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 7.4e-51 206.5 805 27.5
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.6e-50 205.3 780 30.0
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 9.0e-49 199.5 802 29.6
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.7e-47 195.3 842 28.5
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 2.2e-47 194.9 857 26.8
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 2.9e-47 194.5 769 29.3
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 2.9e-47 194.5 763 29.0
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 4.9e-47 193.7 829 27.9
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.9e-46 191.8 990 27.6
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 7.1e-46 189.9 340 38.5
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 2.1e-45 188.3 998 25.7
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 7.9e-45 186.4 997 26.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 5.1e-44 183.7 817 26.3
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 9.6e-43 179.5 786 26.3
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.3e-42 179.1 183 53.6
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.8e-42 177.9 502 33.5
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 3.7e-42 177.6 368 36.1
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 8.2e-42 176.4 784 29.3
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.1e-41 174.5 743 27.6
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 5.3e-41 173.7 813 27.6
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.2e-40 172.6 941 25.6
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 4.5e-40 170.6 883 26.4
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 5.8e-40 170.2 224 46.4
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 1.7e-39 168.7 678 28.2
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 3.2e-38 164.5 772 26.3
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.6e-37 162.2 822 26.5
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 1.1e-35 156.0 918 25.6
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.1e-35 156.0 404 29.5
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.9e-35 155.2 764 27.1
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 3.3e-35 154.5 405 29.6
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 9.7e-35 152.9 766 26.5
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 3.7e-34 151.0 884 26.4
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 3.7e-34 151.0 816 25.5
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 3.7e-34 151.0 816 25.5
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 8.2e-34 149.8 848 27.0
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 3.1e-33 147.9 365 32.3
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 3.1e-33 147.9 176 49.4
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 5.3e-33 147.1 776 25.6
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 6.9e-33 146.7 844 25.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.2e-32 146.0 821 24.6
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.2e-32 146.0 821 24.6
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-32 145.6 494 32.4
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 1.5e-32 145.6 254 39.4
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 6.5e-31 140.2 497 32.4
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 8.5e-31 139.8 258 38.8
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.1e-30 139.4 928 25.2
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.9e-30 138.7 245 39.2
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 7.2e-30 136.7 269 39.4
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.4e-28 132.5 298 35.6
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.3e-28 131.7 756 24.6
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 2.5e-27 128.3 226 41.2
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 5.7e-27 127.1 404 30.9
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.8e-26 124.8 250 37.6
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.4e-25 122.5 219 37.4
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 6.9e-25 120.2 154 44.8
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.5e-24 119.0 175 42.9
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.9e-23 114.8 217 37.3
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 6.7e-20 103.6 297 32.7
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.1e-19 102.8 216 34.3
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.4e-16 91.3 156 43.6
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 4.5e-16 90.9 387 29.7
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 4.4e-11 74.3 151 32.5
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.7e-10 72.4 125 39.2
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 1.7e-10 72.4 386 28.8
CBR_g25863 Chara braunii HOM05D005945 ORTHO05D006749 1.6e-08 65.9 173 31.8
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 3.5e-08 64.7 157 31.2
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 1.0e-07 63.2 176 31.2
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 1.7e-07 62.4 201 31.8
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.5e-06 59.3 148 31.8


User provided reference genes

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