Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 4.9e-196 687.6 338 100.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.0e-152 542.7 336 78.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 3.5e-149 531.9 334 75.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.7e-148 529.6 336 76.8
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-144 516.9 327 75.5
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-143 513.1 336 72.9
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.2e-143 510.8 335 73.4
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.4e-142 510.0 322 76.1
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 4.1e-142 508.4 335 70.4
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.0e-141 506.1 333 73.0
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.5e-141 505.4 338 72.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.5e-141 505.0 338 71.6
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.2e-140 502.7 336 71.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.8e-140 501.9 334 71.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 5.0e-140 501.5 334 72.5
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 5.0e-140 501.5 336 70.8
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 5.0e-140 501.5 333 70.6
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 6.5e-140 501.1 337 72.7
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 8.5e-140 500.7 337 72.4
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.9e-139 499.6 321 75.1
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 3.2e-139 498.8 334 71.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 7.2e-139 497.7 336 72.3
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 2.1e-138 496.1 336 69.6
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 2.7e-138 495.7 336 70.8
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 4.7e-138 495.0 332 71.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.0e-138 494.2 336 69.3
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-137 493.8 337 74.2
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.4e-137 493.4 336 69.0
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.8e-137 493.0 337 72.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.3e-137 492.7 328 70.1
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.3e-137 492.7 334 71.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 3.0e-137 492.3 337 72.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 4.0e-137 491.9 334 71.0
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 4.0e-137 491.9 336 70.2
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 5.2e-137 491.5 336 69.3
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 6.8e-137 491.1 337 70.3
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 6.8e-137 491.1 335 69.3
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-136 490.3 338 69.8
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.7e-136 488.0 337 73.9
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.2e-135 486.1 334 70.4
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 4.8e-135 485.0 323 70.0
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.4e-134 483.4 337 70.0
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.4e-134 483.4 335 68.1
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.4e-134 483.4 336 68.8
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.8e-134 483.0 318 74.2
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.4e-134 481.5 320 71.2
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 9.1e-134 480.7 335 68.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 9.1e-134 480.7 321 71.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.6e-133 479.9 325 70.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 7.7e-133 477.6 320 71.9
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.3e-132 476.9 335 67.5
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 6.5e-132 474.6 327 68.2
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 8.5e-132 474.2 328 68.0
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.2e-131 472.2 336 68.5
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 4.2e-131 471.9 328 68.0
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 4.2e-131 471.9 325 68.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 8.0e-130 467.6 332 68.4
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 8.0e-130 467.6 336 67.0
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.8e-129 466.5 327 69.1
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.0e-128 463.0 320 69.4
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.6e-128 462.6 319 68.0
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 7.0e-126 454.5 333 64.9
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 9.2e-126 454.1 334 63.5
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 2.7e-125 452.6 320 66.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 7.7e-125 451.1 323 66.3
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 7.7e-125 451.1 326 65.6
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 7.7e-125 451.1 326 65.6
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.0e-124 450.7 325 68.6
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.3e-124 450.3 338 63.9
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.3e-124 450.3 334 63.8
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.7e-124 449.9 326 65.3
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.7e-124 449.9 326 65.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.3e-124 449.5 322 66.8
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.9e-124 449.1 308 68.5
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 5.0e-124 448.4 327 65.1
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 8.6e-124 447.6 338 64.5
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 8.6e-124 447.6 334 63.5
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.5e-123 446.8 325 65.2
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.6e-123 444.9 335 63.6
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 8.0e-122 441.0 332 63.3
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 5.2e-121 438.3 320 65.9
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.3e-119 433.7 320 68.4
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.7e-119 433.3 310 65.8
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.9e-119 432.6 338 63.0
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.4e-118 430.3 321 65.4
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.5e-117 425.6 322 62.1
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.8e-117 424.5 323 65.6
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.6e-114 415.6 330 60.6
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.4e-113 413.7 324 62.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 4.7e-98 362.1 310 57.1
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 3.4e-96 355.9 313 55.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.4e-94 350.5 318 56.0
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.1e-92 342.0 293 58.4
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-84 317.8 203 73.9
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.0e-84 317.8 207 72.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 9.6e-83 311.2 307 51.5
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.9e-79 298.9 306 51.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.4e-79 298.5 306 50.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.4e-78 297.4 230 62.2
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.8e-74 282.3 161 84.5
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.4e-73 280.8 215 62.3
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 3.9e-68 262.7 204 62.3
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 4.8e-66 255.8 177 64.4
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-61 241.1 165 67.3
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-60 237.7 133 82.0
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.6e-56 221.9 159 68.6
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.5e-55 218.8 284 44.7
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 8.5e-55 218.4 257 47.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.6e-45 186.0 134 63.4
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.0e-43 180.6 135 63.7
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.1e-41 171.8 143 58.7
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 7.2e-38 162.2 90 78.9
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.0e-27 127.5 127 48.8
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.0e-23 115.2 108 52.8
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.0e-20 103.2 72 68.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.2e-18 97.4 300 29.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.9e-15 87.0 70 64.3
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 3.3e-14 83.6 174 33.9
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 1.2e-08 65.1 247 29.1
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.2e-08 65.1 132 31.1
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 2.0e-08 64.3 112 36.6
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 2.9e-07 60.5 148 27.7


User provided reference genes

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