Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g02750 Coffea canephora HOM05D015450 ORTHO05D017757 1.5e-230 802.4 381 100.0
Rhsim07G0240200 Rhododendron simsii HOM05D015450 ORTHO05D017757 2.7e-73 280.0 398 38.4
PGSC0003DMG400003685 Solanum tuberosum HOM05D015450 ORTHO05D017757 5.8e-68 262.3 392 40.3
DCAR_013825 Daucus carota HOM05D015450 ORTHO05D017757 1.8e-53 214.2 343 36.2
CAN.G1226.28 Capsicum annuum HOM05D015450 ORTHO05D017757 4.3e-39 166.4 389 34.2
COL.COLO4_26298 Corchorus olitorius HOM05D015450 ORTHO05D017757 5.4e-34 149.4 271 33.6
Hma1.2p1_2436F.1_g322150 Hydrangea macrophylla HOM05D015450 ORTHO05D017757 7.9e-17 92.4 110 49.1
QL02p008899 Quercus lobata HOM05D015450 ORTHO05D017757 1.2e-12 78.6 212 29.2
Manes.18G108700 Manihot esculenta HOM05D010448 ORTHO05D012537 2.6e-12 77.4 279 23.7
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 6.5e-11 72.8 191 30.4
Thhalv10004464m.g Eutrema salsugineum HOM05D007162 ORTHO05D007631 4.2e-10 70.1 284 28.5
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 9.3e-10 68.9 365 24.1
CANSAT56G1457 Cannabis sativa HOM05D000664 ORTHO05D000491 1.2e-09 68.6 255 27.1
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.6e-09 66.6 253 26.5
Gohir.D12G199200 Gossypium hirsutum HOM05D000664 ORTHO05D000491 6.1e-09 66.2 248 27.4
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 7.9e-09 65.9 295 26.1
Gorai.008G214400 Gossypium raimondii HOM05D000664 ORTHO05D000491 7.9e-09 65.9 245 27.3
COL.COLO4_37361 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.3e-08 64.3 251 29.9
FvH4_4g20690 Fragaria vesca HOM05D007162 ORTHO05D007631 5.1e-08 63.2 256 26.2
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 5.1e-08 63.2 249 26.9
Os08g0529400 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D010075 6.7e-08 62.8 371 24.3
FAN07G2689 Fragaria x ananassa HOM05D007162 ORTHO05D007631 8.7e-08 62.4 256 26.2
FAN12G3043 Fragaria x ananassa HOM05D007162 ORTHO05D007631 8.7e-08 62.4 256 26.2
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-07 62.0 297 26.6
COL.COLO4_37351 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.7e-07 59.7 257 24.1
Aqoxy3G01080 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 9.7e-07 58.9 275 26.2
BraA02t08804Z Brassica rapa HOM05D007162 ORTHO05D007631 9.7e-07 58.9 263 27.4
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 1.3e-06 58.5 281 25.6
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.6e-06 58.2 261 24.5
FAN07G0903 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.2e-06 57.8 223 24.7
A02p38240 Brassica napus HOM05D007162 ORTHO05D007631 2.8e-06 57.4 258 26.7
BolC2t11828H Brassica oleracea HOM05D007162 ORTHO05D007631 3.7e-06 57.0 257 26.8
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 4.8e-06 56.6 280 25.4


User provided reference genes

Program Settings