Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 7.5e-127 457.2 235 100.0
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 3.7e-81 305.4 230 65.2
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 5.8e-79 298.1 237 63.3
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 5.5e-77 291.6 231 61.5
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 6.7e-75 284.6 227 61.7
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 5.7e-74 281.6 235 60.0
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 1.6e-73 280.0 235 62.1
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 4.1e-72 275.4 237 58.6
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 2.6e-71 272.7 204 64.2
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 2.6e-71 272.7 213 61.0
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 5.9e-71 271.6 235 57.4
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 5.9e-71 271.6 230 60.0
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 7.6e-71 271.2 192 70.3
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.0e-70 270.8 211 60.7
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 5.5e-69 265.0 235 58.7
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 5.5e-69 265.0 230 57.8
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.2e-68 263.8 230 57.8
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 1.6e-68 263.5 237 59.9
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 3.5e-68 262.3 202 64.4
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 6.1e-68 261.5 235 59.1
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 1.0e-67 260.8 235 59.1
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 5.1e-67 258.5 230 57.0
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 1.1e-66 257.3 231 58.9
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.9e-66 256.5 235 58.7
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 5.7e-66 255.0 232 56.9
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.3e-65 253.8 233 57.9
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.3e-65 253.8 230 57.8
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.6e-65 253.4 230 57.8
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.6e-65 253.4 230 57.8
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 2.2e-65 253.1 230 57.8
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 3.7e-65 252.3 197 62.4
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 4.8e-65 251.9 197 60.4
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 6.3e-65 251.5 201 60.7
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 8.2e-65 251.1 201 62.2
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 1.8e-64 250.0 230 54.3
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 1.8e-64 250.0 235 56.2
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 4.1e-64 248.8 194 60.3
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 5.3e-64 248.4 199 61.3
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 6.9e-64 248.1 232 58.2
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 6.9e-64 248.1 234 54.3
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 9.0e-64 247.7 255 53.3
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 1.2e-63 247.3 194 61.3
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 2.6e-63 246.1 236 54.2
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 4.5e-63 245.4 230 55.7
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.5e-63 245.4 197 60.9
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 5.9e-63 245.0 264 52.7
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 1.0e-62 244.2 232 56.5
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 1.3e-62 243.8 194 59.3
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 1.3e-62 243.8 230 52.2
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 1.7e-62 243.4 232 53.4
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 1.7e-62 243.4 230 55.7
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 1.7e-62 243.4 230 56.5
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 3.8e-62 242.3 236 55.1
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 5.0e-62 241.9 232 52.6
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 6.5e-62 241.5 230 53.9
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 8.5e-62 241.1 230 52.2
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 1.1e-61 240.7 235 55.7
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 1.4e-61 240.4 210 57.1
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 2.5e-61 239.6 194 58.2
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 2.5e-61 239.6 194 58.2
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 4.2e-61 238.8 194 58.2
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 4.2e-61 238.8 235 52.8
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 4.2e-61 238.8 194 59.3
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 7.2e-61 238.0 233 52.8
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.2e-60 237.3 229 52.0
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 2.7e-60 236.1 232 55.2
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 2.7e-60 236.1 190 58.4
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 4.6e-60 235.3 194 57.7
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 7.9e-60 234.6 194 56.7
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 7.9e-60 234.6 228 53.5
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 3.0e-59 232.6 231 54.5
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 3.9e-59 232.3 231 54.5
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 6.7e-59 231.5 230 54.3
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 8.8e-59 231.1 229 50.7
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 1.1e-58 230.7 230 52.2
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 2.0e-58 229.9 232 53.9
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 2.0e-58 229.9 194 56.2
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 2.0e-58 229.9 194 56.2
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 4.3e-58 228.8 235 51.1
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 7.4e-58 228.0 230 50.4
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 7.4e-58 228.0 230 52.2
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 9.7e-58 227.6 233 53.6
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 9.7e-58 227.6 194 55.7
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 1.3e-57 227.3 190 55.8
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 1.7e-57 226.9 230 53.0
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.7e-57 226.9 231 50.2
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 3.7e-57 225.7 240 49.6
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 4.8e-57 225.3 190 55.3
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 4.8e-57 225.3 176 62.5
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 4.8e-57 225.3 230 53.0
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 1.1e-56 224.2 230 49.6
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.4e-56 223.8 184 57.1
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 1.8e-56 223.4 236 50.4
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 2.4e-56 223.0 230 50.4
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 4.1e-56 222.2 231 49.8
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 5.3e-56 221.9 204 56.4
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 6.9e-56 221.5 193 56.5
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 9.1e-56 221.1 195 55.4
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 3.4e-55 219.2 248 48.8
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 3.4e-55 219.2 235 50.2
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.1e-53 214.2 229 47.2
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 3.2e-53 212.6 200 51.5
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 3.2e-53 212.6 242 47.1
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 7.2e-53 211.5 230 45.7
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.4e-51 207.2 183 53.0
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 5.1e-51 205.3 244 46.7
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 6.7e-51 204.9 195 53.3
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 2.0e-50 203.4 244 46.3
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.6e-50 203.0 244 46.3
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 5.7e-50 201.8 231 48.1
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 1.7e-49 200.3 157 60.5
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 2.8e-49 199.5 183 50.3
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.1e-48 197.6 187 52.4
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 3.1e-48 196.1 195 49.2
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 3.5e-47 192.6 255 44.3
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.7e-46 190.3 262 42.4
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 8.5e-46 188.0 230 44.3
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.9e-45 186.8 233 44.2
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 5.5e-45 185.3 158 56.3
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 5.5e-45 185.3 123 72.4
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 2.1e-44 183.3 230 49.1
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.0e-43 179.1 142 62.0
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 7.5e-42 174.9 136 61.8
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 3.1e-40 169.5 230 44.3
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 1.0e-38 164.5 253 39.9
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.5e-37 160.6 237 42.6
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 2.0e-34 150.2 314 34.1
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 4.4e-34 149.1 154 50.6
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 2.8e-33 146.4 238 38.7
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 9.1e-32 141.4 237 37.1
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 5.9e-31 138.7 242 39.3
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.3e-27 126.7 184 39.1
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 3.0e-27 126.3 116 54.3
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.6e-26 123.2 183 38.3
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 2.4e-24 116.7 209 36.8
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.2e-20 104.4 76 63.2
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 3.0e-19 99.8 143 39.2
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.2e-15 87.8 88 48.9
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 2.3e-14 83.6 95 46.3
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 7.3e-13 78.6 84 45.2
Cre02.g086750 Chlamydomonas reinhardtii HOM05D004951 ORTHO05D005840 2.2e-09 67.0 176 26.7


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