Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 2.3e-75 285.4 141 100.0
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 1.1e-45 186.8 137 67.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.1e-43 180.3 139 64.0
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.4e-43 179.9 139 62.6
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 2.4e-43 179.1 139 62.6
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 1.7e-41 172.9 109 67.9
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.2e-41 172.6 93 81.7
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 3.8e-41 171.8 141 58.9
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 3.2e-40 168.7 106 69.8
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 9.3e-40 167.2 106 67.9
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 9.3e-40 167.2 106 67.9
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 4.6e-39 164.9 106 67.0
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 1.0e-38 163.7 93 77.4
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.8e-38 162.9 137 62.0
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 1.8e-38 162.9 115 64.3
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.3e-38 162.5 146 56.8
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 3.0e-38 162.2 125 61.6
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.0e-38 162.2 131 58.8
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 3.0e-38 162.2 106 67.0
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 3.0e-38 162.2 142 58.5
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 5.1e-38 161.4 95 76.8
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 5.1e-38 161.4 92 77.2
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 8.7e-38 160.6 93 76.3
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 8.7e-38 160.6 93 76.3
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.1e-37 160.2 128 60.2
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.1e-37 160.2 93 76.3
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.5e-37 159.8 95 73.7
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.9e-37 159.5 118 62.7
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 4.3e-37 158.3 132 56.1
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 4.3e-37 158.3 128 59.4
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 5.7e-37 157.9 93 76.3
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 5.7e-37 157.9 101 70.3
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 5.7e-37 157.9 95 70.5
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 9.6e-37 157.1 109 62.4
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.3e-36 156.8 128 59.4
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.3e-36 156.8 109 64.2
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.6e-36 156.4 97 71.1
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 1.6e-36 156.4 93 73.1
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.6e-36 156.4 91 74.7
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 2.1e-36 156.0 106 65.1
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 2.1e-36 156.0 100 69.0
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 3.7e-36 155.2 95 74.7
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 3.7e-36 155.2 119 58.8
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 4.8e-36 154.8 130 54.6
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 6.3e-36 154.5 128 58.6
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 8.2e-36 154.1 93 68.8
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 8.2e-36 154.1 92 75.0
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.1e-35 153.7 89 73.0
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.1e-35 153.7 91 73.6
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.1e-35 153.7 99 68.7
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.4e-35 153.3 99 66.7
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.4e-35 153.3 100 69.0
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.8e-35 152.9 122 57.4
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.8e-35 152.9 101 64.4
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 2.4e-35 152.5 89 74.2
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 4.1e-35 151.8 93 69.9
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 4.1e-35 151.8 89 70.8
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 5.3e-35 151.4 93 71.0
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 5.3e-35 151.4 100 67.0
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 5.3e-35 151.4 99 66.7
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 6.9e-35 151.0 124 57.3
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 9.0e-35 150.6 91 71.4
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.2e-34 150.2 115 62.6
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.2e-34 150.2 133 55.6
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.5e-34 149.8 93 71.0
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.6e-34 149.1 119 59.7
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 4.5e-34 148.3 90 71.1
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 5.9e-34 147.9 93 73.1
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 5.9e-34 147.9 109 58.7
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.0e-33 147.1 106 62.3
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.0e-33 147.1 122 54.9
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.0e-33 147.1 106 62.3
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.0e-33 147.1 106 62.3
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.0e-33 147.1 122 54.9
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.0e-33 147.1 98 66.3
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 1.0e-33 147.1 95 72.6
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.7e-33 146.4 122 57.4
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.7e-33 146.4 101 62.4
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 2.9e-33 145.6 98 66.3
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 3.8e-33 145.2 101 62.4
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 3.8e-33 145.2 101 62.4
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.9e-32 142.9 101 63.4
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 3.2e-32 142.1 93 67.7
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 4.2e-32 141.7 91 68.1
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 5.5e-32 141.4 95 66.3
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.2e-31 140.2 132 52.3
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 1.6e-31 139.8 90 67.8
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 2.7e-31 139.0 90 67.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 3.6e-31 138.7 90 66.7
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 4.6e-31 138.3 89 67.4
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 4.6e-31 138.3 91 65.9
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 3.0e-30 135.6 111 55.9
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 3.9e-30 135.2 158 48.1
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.1e-29 133.7 87 66.7
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 1.9e-29 132.9 117 55.6
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 2.2e-28 129.4 99 62.6
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.4e-27 126.7 93 64.5
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.4e-27 126.7 92 60.9
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 5.3e-27 124.8 91 64.8
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.0e-25 120.6 109 53.2
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 2.5e-24 115.9 130 44.6
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 7.9e-23 110.9 59 81.4
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 2.3e-22 109.4 63 73.0
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.0e-22 109.0 94 56.4
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 5.7e-21 104.8 59 76.3
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.8e-20 102.4 83 55.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 4.1e-19 98.6 85 55.3
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 4.1e-19 98.6 55 78.2
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 5.3e-19 98.2 56 71.4
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 1.5e-18 96.7 137 43.8
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 1.3e-17 93.6 124 41.9
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 5.5e-16 88.2 99 47.5
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.0e-14 84.0 97 45.4
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 4.1e-11 72.0 59 54.2
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 9.1e-11 70.9 103 37.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 2.2e-09 66.2 42 73.8
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 5.0e-09 65.1 41 68.3
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 1.0e-06 57.4 36 72.2


User provided reference genes

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