Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.0e-279 966.1 475 100.0
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 8.1e-205 717.2 457 76.6
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 7.4e-198 694.1 432 74.5
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.1e-193 680.2 425 75.3
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.1e-190 670.2 438 72.4
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 5.7e-190 667.9 429 73.9
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 2.8e-189 665.6 453 70.2
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.8e-188 662.9 438 72.1
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.4e-188 662.5 412 75.5
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 6.9e-188 661.0 457 68.9
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 4.5e-187 658.3 444 70.7
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.0e-186 657.1 432 72.9
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.9e-186 655.6 435 72.4
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 5.0e-186 654.8 428 72.2
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.9e-185 652.9 457 68.5
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 9.4e-185 650.6 432 72.2
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.8e-183 646.4 424 71.7
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 3.0e-183 645.6 413 73.6
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.5e-182 643.3 428 71.3
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 2.6e-182 642.5 464 66.2
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 3.3e-182 642.1 432 72.2
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 7.4e-182 641.0 456 66.7
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 6.3e-181 637.9 428 70.6
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 8.2e-181 637.5 425 71.5
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.8e-180 636.3 432 69.2
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 9.1e-180 634.0 425 71.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.5e-179 633.3 434 69.4
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 3.4e-179 632.1 485 63.5
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.4e-179 632.1 432 69.0
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.0e-178 630.6 429 70.9
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.7e-178 629.8 425 69.9
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 2.7e-176 622.5 448 66.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.1e-176 621.3 413 70.5
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 7.9e-176 620.9 417 70.7
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 7.9e-176 620.9 458 65.5
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.0e-175 620.5 456 64.9
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.8e-175 619.8 429 68.5
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 3.0e-175 619.0 425 68.2
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.9e-175 618.6 441 66.9
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.7e-175 617.8 454 65.4
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.4e-174 615.1 413 70.2
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 9.7e-174 614.0 424 68.9
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.3e-173 613.6 449 65.0
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 2.8e-173 612.5 435 65.1
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 8.2e-173 610.9 444 64.9
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 3.1e-172 609.0 425 66.4
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 3.1e-172 609.0 426 66.4
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 2.0e-171 606.3 430 67.7
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.9e-169 599.7 442 64.3
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.9e-169 599.7 442 64.3
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 3.2e-169 599.0 438 64.6
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.2e-169 599.0 410 68.8
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 4.2e-169 598.6 426 64.8
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 9.4e-169 597.4 432 64.1
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.2e-168 597.0 428 65.2
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.2e-168 597.0 455 64.0
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.6e-168 596.7 427 65.6
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 4.7e-168 595.1 442 63.6
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 4.7e-168 595.1 442 64.0
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 8.8e-167 590.9 433 64.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.7e-165 586.6 372 74.7
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 4.1e-164 582.0 429 62.7
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 9.1e-164 580.9 466 61.4
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-163 579.7 441 65.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.7e-162 576.6 426 63.4
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.1e-161 573.9 448 61.8
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.5e-161 572.8 426 62.7
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.0e-159 567.4 460 61.3
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 5.2e-159 565.1 409 65.3
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.4e-158 562.4 432 63.4
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 1.3e-157 560.5 449 61.5
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.2e-157 559.7 432 64.1
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.8e-156 556.6 425 64.9
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 9.5e-153 544.3 397 65.7
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-149 533.9 416 65.9
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.0e-147 526.6 432 61.1
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 4.5e-147 525.4 427 60.4
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 3.8e-146 522.3 436 61.2
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 8.6e-146 521.2 333 74.5
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-142 510.8 405 64.4
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.4e-142 509.2 356 70.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.3e-138 497.3 327 69.1
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 6.6e-138 495.0 409 59.7
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.8e-135 486.9 334 69.5
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.0e-135 485.7 415 60.5
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 4.4e-134 482.3 419 55.1
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 4.4e-134 482.3 402 57.0
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 4.4e-134 482.3 421 55.1
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 5.8e-134 481.9 353 66.9
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 4.3e-129 465.7 449 52.1
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 9.9e-126 454.5 337 63.2
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.9e-124 450.3 334 64.7
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 1.1e-111 407.9 426 47.4
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 4.6e-107 392.5 228 79.4
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 7.4e-97 358.6 215 76.7
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.6e-86 323.6 236 68.2
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.1e-76 291.6 194 70.1
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.7e-72 277.7 262 56.1
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.6e-57 227.3 377 36.6
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.7e-56 224.6 130 83.1
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.7e-56 224.6 130 83.1
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 7.0e-55 219.2 164 64.6
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 1.5e-44 184.9 351 34.8
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 9.8e-41 172.2 160 54.4
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.5e-36 158.3 129 57.4
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 2.7e-30 137.5 70 91.4
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-29 135.2 142 52.1
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-29 135.2 142 52.1
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.1e-28 132.1 121 53.7
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.1e-20 105.5 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 3.3e-20 104.0 77 68.8
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 2.0e-17 94.7 204 30.9
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 9.8e-17 92.4 236 27.5
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.1e-15 89.0 210 31.4
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 3.3e-12 77.4 377 20.4
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.2e-11 73.2 86 41.9
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.6e-06 58.5 77 39.0


User provided reference genes

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