Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 0.0e+00 1448.3 849 100.0
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 1.6e-147 527.7 786 46.2
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.6e-142 511.1 844 44.5
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 3.3e-140 503.4 803 45.5
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 2.8e-139 500.4 727 47.0
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 3.2e-135 486.9 801 42.7
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.8e-131 473.8 832 41.8
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 3.7e-131 473.4 821 42.6
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 5.3e-130 469.5 879 41.0
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 9.0e-130 468.8 811 43.0
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 9.3e-127 458.8 770 41.3
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.2e-126 458.4 827 42.6
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 3.5e-126 456.8 826 40.1
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 7.9e-126 455.7 769 43.0
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.8e-125 454.5 803 42.2
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 7.4e-124 449.1 820 42.4
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 1.6e-123 448.0 747 42.2
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 2.6e-121 440.7 534 54.7
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.4e-121 440.3 815 41.2
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 4.5e-121 439.9 815 41.3
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.7e-121 439.1 770 43.1
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.9e-119 434.5 770 42.5
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 5.5e-119 433.0 842 42.5
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 7.2e-119 432.6 546 48.0
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 7.9e-118 429.1 775 40.4
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 6.7e-117 426.0 771 40.2
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 8.8e-117 425.6 774 40.7
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 9.7e-116 422.2 807 40.3
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 2.2e-115 421.0 806 40.3
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.8e-114 417.9 801 40.8
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.8e-114 417.9 768 40.4
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 3.1e-114 417.2 543 53.2
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 2.0e-113 414.5 792 38.4
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 5.9e-113 412.9 805 39.5
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 2.2e-112 411.0 795 38.2
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 2.2e-112 411.0 802 39.9
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.1e-111 408.7 768 39.7
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.1e-111 408.7 788 40.1
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 7.2e-111 406.0 556 45.9
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 3.0e-109 400.6 777 39.3
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.7e-107 394.8 770 40.1
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.4e-106 391.7 777 38.6
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 2.4e-106 391.0 769 38.4
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 5.3e-106 389.8 773 38.9
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.1e-106 389.0 771 39.9
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.5e-105 388.3 779 40.1
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.3e-104 385.2 770 39.9
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.3e-104 385.2 778 38.9
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 6.5e-104 382.9 796 38.3
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 2.8e-99 367.5 582 43.1
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 3.7e-99 367.1 828 36.7
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.2e-97 362.1 771 36.8
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.6e-97 361.7 493 44.8
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.6e-97 361.7 768 36.3
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.6e-97 361.7 801 37.1
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 4.5e-97 360.1 805 36.5
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.3e-96 358.6 772 39.8
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 2.2e-96 357.8 771 38.4
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 2.5e-95 354.4 771 36.4
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 3.6e-94 350.5 792 36.7
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 3.1e-90 337.4 480 44.2
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 4.1e-90 337.0 781 36.4
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 5.4e-90 336.7 774 36.0
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 2.0e-89 334.7 783 35.0
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 2.0e-89 334.7 779 36.2
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 4.5e-89 333.6 792 39.0
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.0e-88 332.4 778 34.6
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.1e-87 328.9 772 34.3
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.1e-87 328.9 772 34.3
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.6e-86 325.1 398 49.2
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 4.5e-81 307.0 772 35.6
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.3e-80 304.7 420 46.0
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 1.5e-79 302.0 606 39.8
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 1.2e-78 298.9 454 42.5
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 2.8e-78 297.7 592 38.3
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 1.3e-75 288.9 793 33.7
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.7e-75 288.5 446 48.7
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.8e-74 285.0 809 32.0
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 6.2e-70 270.0 265 58.1
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 9.8e-68 262.7 806 32.9
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 8.3e-67 259.6 778 35.7
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 8.6e-64 249.6 774 32.4
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 9.8e-60 236.1 624 41.7
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 9.8e-60 236.1 479 41.3
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.9e-55 221.9 781 31.9
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 8.9e-53 213.0 389 37.8
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 4.6e-41 174.1 183 54.1
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 7.8e-41 173.3 557 28.7
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 5.1e-40 170.6 525 29.5
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 8.1e-38 163.3 788 26.3
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.8e-30 138.3 355 38.6
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 4.8e-30 137.5 323 35.9
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 5.5e-26 124.0 868 24.1
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.7e-25 121.7 175 46.9
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 6.7e-24 117.1 333 33.6
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 5.3e-21 107.5 124 47.6
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.5e-15 88.6 79 63.3
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 2.5e-15 88.6 82 63.4
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 2.5e-15 88.6 82 63.4
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 2.8e-14 85.1 82 59.8
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 1.2e-12 79.7 70 62.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.2e-10 71.2 131 38.9
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.1e-09 68.9 147 38.8


User provided reference genes

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