Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 4.1e-257 891.0 476 100.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 4.0e-103 379.4 492 49.2
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 3.8e-101 372.9 473 48.6
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.5e-97 360.9 497 46.3
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-95 354.4 491 48.9
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 3.2e-92 343.2 489 44.4
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 5.5e-92 342.4 473 48.4
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 2.2e-85 320.5 494 44.3
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 7.2e-84 315.5 490 46.3
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 6.9e-79 298.9 527 40.8
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 9.1e-79 298.5 453 46.4
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.2e-78 298.1 447 43.0
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.4e-78 296.6 527 40.6
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 3.4e-78 296.6 624 36.5
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.3e-77 294.7 502 40.4
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.3e-77 294.7 481 39.5
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.7e-77 294.3 488 45.3
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 6.5e-77 292.4 492 45.3
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.5e-76 290.4 411 44.3
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 4.2e-76 289.7 543 40.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 5.5e-76 289.3 444 42.8
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.2e-75 288.1 485 43.9
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.0e-74 285.0 494 39.9
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.9e-74 283.1 444 42.3
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 7.4e-73 278.9 543 38.1
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 7.4e-73 278.9 491 39.3
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 3.7e-72 276.6 488 39.3
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 1.8e-71 274.2 524 38.2
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 9.1e-71 271.9 506 37.4
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.6e-70 270.4 507 38.7
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 4.5e-70 269.6 501 38.1
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 8.5e-69 265.4 547 36.2
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 3.2e-68 263.5 488 38.9
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 3.2e-68 263.5 309 49.5
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.2e-67 261.5 492 38.6
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.2e-67 261.5 488 41.6
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 6.1e-67 259.2 494 40.5
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 7.9e-67 258.8 498 38.4
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 1.4e-66 258.1 580 35.2
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.4e-66 258.1 544 35.8
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.0e-65 254.2 496 40.7
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.0e-65 254.2 491 36.9
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 5.7e-65 252.7 487 39.4
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 3.7e-64 250.0 504 38.1
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 3.7e-64 250.0 495 37.6
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 4.1e-63 246.5 365 41.1
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 2.0e-62 244.2 528 34.8
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.3e-61 241.5 487 35.1
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 2.9e-61 240.4 487 36.1
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 3.8e-61 240.0 422 37.9
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.1e-60 238.4 415 40.7
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 3.2e-60 236.9 425 36.9
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 7.2e-60 235.7 536 35.3
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.7e-59 233.0 541 34.0
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 8.0e-59 232.3 483 35.8
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.0e-58 231.9 483 35.8
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.4e-58 231.5 492 36.0
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.3e-58 230.7 571 33.8
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 3.3e-57 226.9 552 35.9
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 3.3e-57 226.9 524 34.9
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 5.7e-57 226.1 320 44.1
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 1.3e-56 224.9 579 34.2
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 8.2e-56 222.2 474 36.1
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 4.1e-55 219.9 518 34.7
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.2e-54 218.4 449 36.7
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.5e-54 216.9 517 33.5
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 7.7e-54 215.7 491 35.2
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 5.0e-53 213.0 476 34.7
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 5.0e-53 213.0 617 32.7
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 8.5e-53 212.2 565 31.3
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.1e-52 211.8 354 39.5
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.5e-52 210.7 340 41.2
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 4.7e-51 206.5 538 32.9
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 8.0e-51 205.7 329 41.3
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.0e-50 205.3 476 35.7
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 1.8e-50 204.5 507 34.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 3.0e-50 203.8 491 33.6
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 3.0e-50 203.8 512 34.2
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 3.0e-50 203.8 473 34.7
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 3.0e-50 203.8 366 41.0
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 5.2e-50 203.0 540 31.5
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 1.5e-49 201.4 555 32.1
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.0e-49 201.1 516 33.3
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.0e-49 201.1 432 35.0
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 4.4e-49 199.9 521 32.6
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 1.3e-48 198.4 368 37.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 2.2e-48 197.6 444 34.0
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 2.2e-48 197.6 563 33.4
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 1.8e-47 194.5 472 33.9
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.2e-46 191.8 418 34.9
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 2.7e-46 190.7 410 34.9
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 3.5e-46 190.3 525 32.4
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 3.8e-45 186.8 492 34.3
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 4.2e-44 183.3 416 34.6
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 2.1e-43 181.0 597 31.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 9.8e-41 172.2 403 32.8
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.3e-40 171.8 366 36.6
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.7e-40 171.4 533 30.2
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 2.0e-38 164.5 589 30.1
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 2.0e-38 164.5 589 30.1
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.3e-37 161.8 358 34.9
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.3e-37 161.0 450 32.7
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 2.9e-37 160.6 588 29.3
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 5.8e-33 146.4 255 38.0
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 6.4e-32 142.9 303 37.3
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.4e-31 141.0 169 46.2
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 7.0e-31 139.4 479 29.4
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.6e-30 138.3 386 31.6
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 2.3e-29 134.4 473 29.4
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.3e-28 130.6 406 29.6
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 1.6e-27 128.3 511 28.2
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.0e-25 121.3 296 33.8
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.4e-23 114.4 209 37.8
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 8.1e-19 99.4 212 36.8
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 3.9e-13 80.5 91 51.6
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 1.9e-12 78.2 93 46.2


User provided reference genes

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