Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 7.1e-165 583.9 313 100.0
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 2.5e-117 426.0 299 78.3
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 4.2e-117 425.2 314 75.8
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 1.4e-115 420.2 313 73.8
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 8.8e-115 417.5 314 74.8
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.7e-113 413.3 315 73.3
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 2.2e-113 412.9 308 74.7
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 2.2e-113 412.9 291 78.7
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 2.8e-113 412.5 306 75.2
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 2.8e-113 412.5 313 73.5
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 2.8e-113 412.5 317 73.2
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 4.8e-113 411.8 315 73.3
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 6.3e-113 411.4 315 73.0
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 6.3e-113 411.4 308 73.1
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 8.2e-113 411.0 311 73.0
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 1.4e-112 410.2 313 73.2
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.4e-112 410.2 313 73.2
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 1.8e-112 409.8 308 75.0
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.8e-112 409.8 308 74.0
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 3.1e-112 409.1 308 74.4
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 3.1e-112 409.1 317 72.6
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 9.1e-112 407.5 313 73.8
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 9.1e-112 407.5 313 71.9
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 3.5e-111 405.6 318 73.6
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 5.9e-111 404.8 291 76.6
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 5.9e-111 404.8 290 74.1
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 7.7e-111 404.4 286 77.3
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 7.7e-111 404.4 308 73.4
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.1e-109 400.6 291 76.3
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 1.5e-109 400.2 309 72.2
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 1.9e-109 399.8 311 70.7
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.9e-109 399.8 296 75.0
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 5.5e-109 398.3 307 72.3
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 7.2e-109 397.9 304 73.4
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 1.6e-108 396.7 308 70.8
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 2.7e-108 396.0 299 74.6
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 2.7e-108 396.0 313 71.2
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 2.3e-107 392.9 296 74.7
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 2.3e-107 392.9 295 74.9
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 3.0e-107 392.5 294 73.8
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 3.0e-107 392.5 315 69.8
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 4.0e-107 392.1 298 72.8
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 1.2e-106 390.6 295 74.6
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 1.2e-106 390.6 315 72.7
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 1.5e-106 390.2 313 69.6
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 2.0e-106 389.8 307 72.6
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 2.0e-106 389.8 302 73.5
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 2.6e-106 389.4 308 72.4
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 5.7e-106 388.3 298 72.5
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 5.7e-106 388.3 313 71.9
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 7.5e-106 387.9 300 71.7
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 9.7e-106 387.5 298 71.1
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 9.7e-106 387.5 296 74.3
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 2.8e-105 386.0 257 81.3
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 3.7e-105 385.6 262 79.4
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 8.2e-105 384.4 295 73.2
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 1.4e-104 383.6 313 70.0
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 2.4e-104 382.9 257 79.8
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 2.4e-104 382.9 305 69.5
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 4.1e-104 382.1 295 71.9
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 4.1e-104 382.1 300 71.7
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 9.1e-104 380.9 280 76.1
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 5.9e-103 378.3 309 69.3
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 5.9e-103 378.3 295 69.8
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 1.5e-101 373.6 308 67.9
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 2.7e-100 369.4 252 76.6
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 6.3e-97 358.2 273 71.1
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.1e-96 357.5 277 70.8
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 1.3e-94 350.5 308 66.9
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 4.2e-93 345.5 256 73.4
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 7.2e-93 344.7 313 65.8
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 1.2e-92 344.0 294 65.0
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 8.9e-91 337.8 271 68.3
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 5.9e-87 325.1 291 61.2
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 1.8e-83 313.5 259 63.7
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 1.5e-82 310.5 313 58.5
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 4.4e-82 308.9 261 65.1
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 3.3e-77 292.7 274 62.8
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 6.6e-70 268.5 192 74.5
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 4.7e-68 262.3 192 76.0
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 6.2e-68 261.9 169 84.0
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.1e-67 261.2 204 68.1
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 3.8e-57 226.1 236 53.8
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 4.2e-56 222.6 225 60.4
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.1e-53 214.5 144 82.6
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 2.4e-51 206.8 193 64.8
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 4.4e-50 202.6 149 76.5
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 1.1e-48 198.0 298 48.7
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 4.8e-44 182.6 125 82.4
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 3.8e-33 146.4 103 74.8
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 1.9e-29 134.0 178 47.2
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 4.9e-25 119.4 120 56.7
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 9.7e-21 105.1 130 52.3
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.5e-13 80.5 52 86.5
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 5.3e-11 72.8 47 76.6


User provided reference genes

Program Settings