Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 1.5e-71 272.7 133 100.0
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 8.3e-30 134.0 103 66.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 5.3e-29 131.3 102 64.7
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.1e-29 130.6 102 63.7
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.1e-29 130.6 102 63.7
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 2.0e-28 129.4 85 69.4
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 5.9e-28 127.9 82 74.4
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 1.0e-27 127.1 80 71.2
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.3e-27 126.7 97 68.0
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 1.7e-27 126.3 80 71.2
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 5.0e-27 124.8 85 69.4
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 6.5e-27 124.4 79 72.2
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 6.5e-27 124.4 81 71.6
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 1.1e-26 123.6 87 67.8
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 4.2e-26 121.7 80 71.2
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 4.2e-26 121.7 79 69.6
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 5.5e-26 121.3 81 70.4
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 7.2e-26 120.9 79 70.9
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 9.4e-26 120.6 80 72.5
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 1.2e-25 120.2 79 70.9
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.2e-25 120.2 90 63.3
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 1.2e-25 120.2 94 60.6
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 1.2e-25 120.2 88 65.9
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 1.6e-25 119.8 80 70.0
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 2.1e-25 119.4 79 70.9
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 2.1e-25 119.4 81 66.7
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 2.1e-25 119.4 83 67.5
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 4.7e-25 118.2 89 60.7
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 4.7e-25 118.2 99 58.6
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 4.7e-25 118.2 79 69.6
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 1.4e-24 116.7 80 66.2
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 1.4e-24 116.7 80 66.2
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 3.0e-24 115.5 79 67.1
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 3.0e-24 115.5 80 67.5
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 5.2e-24 114.8 84 64.3
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 5.2e-24 114.8 84 64.3
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 5.2e-24 114.8 73 75.3
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 5.2e-24 114.8 106 56.6
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 5.2e-24 114.8 79 67.1
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 6.8e-24 114.4 79 67.1
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 1.2e-23 113.6 94 61.7
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 1.5e-23 113.2 81 65.4
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 1.5e-23 113.2 79 65.8
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 1.5e-23 113.2 79 65.8
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 2.6e-23 112.5 82 58.5
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 3.4e-23 112.1 84 61.9
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 3.4e-23 112.1 81 65.4
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 5.7e-23 111.3 79 64.6
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 5.7e-23 111.3 79 64.6
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 5.7e-23 111.3 79 64.6
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 5.7e-23 111.3 94 58.5
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 5.7e-23 111.3 80 62.5
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 9.8e-23 110.5 79 64.6
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 9.8e-23 110.5 79 64.6
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 9.8e-23 110.5 81 65.4
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 1.7e-22 109.8 79 64.6
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 2.2e-22 109.4 80 61.2
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 4.8e-22 108.2 79 64.6
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 8.3e-22 107.5 79 63.3
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 7.0e-21 104.4 80 63.8
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 1.6e-20 103.2 83 60.2
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 6.6e-19 97.8 82 56.1
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 1.1e-18 97.1 73 58.9
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 4.2e-18 95.1 88 53.4
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 1.2e-17 93.6 73 61.6
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 3.6e-17 92.0 98 49.0
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 3.6e-17 92.0 56 71.4
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 1.0e-16 90.5 77 58.4
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 1.0e-16 90.5 79 57.0
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 1.4e-16 90.1 79 57.0
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 6.8e-16 87.8 80 52.5
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 1.6e-12 76.6 56 58.9
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 5.9e-12 74.7 48 64.6
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 1.1e-10 70.5 84 44.0
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 4.7e-09 65.1 73 42.5
SEGI_25488 Sequoiadendron giganteum HOM05D007940 ORTHO05D010046 1.0e-08 63.9 96 32.3
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 2.3e-08 62.8 79 39.2


User provided reference genes

Program Settings