Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 3.0e-147 526.6 699 100.0
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 7.4e-45 186.4 680 75.7
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 1.6e-44 185.3 656 78.2
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 1.6e-44 185.3 680 75.6
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 2.8e-44 184.5 680 75.6
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.2e-42 179.1 150 62.7
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 2.9e-41 174.5 680 75.7
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 1.9e-40 171.8 682 77.4
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 1.6e-39 168.7 690 76.8
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 2.1e-39 168.3 672 59.2
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 6.0e-39 166.8 155 58.1
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.3e-38 165.6 656 80.3
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 1.8e-38 165.2 669 79.1
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 2.3e-38 164.9 679 71.1
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 5.1e-38 163.7 679 72.8
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 6.7e-38 163.3 653 79.3
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 6.7e-38 163.3 657 77.3
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 8.7e-38 162.9 654 77.1
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.7e-36 157.5 671 72.0
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 1.1e-35 156.0 671 72.0
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 2.4e-35 154.8 102 75.5
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 3.1e-35 154.5 658 78.9
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 4.0e-35 154.1 133 58.6
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 5.3e-35 153.7 135 62.2
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 9.0e-35 152.9 681 69.9
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 1.2e-34 152.5 143 59.4
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 1.2e-34 152.5 665 75.5
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 2.0e-34 151.8 689 74.0
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 2.0e-34 151.8 689 74.0
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 3.4e-34 151.0 166 54.2
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 4.5e-34 150.6 133 58.6
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 1.3e-33 149.1 164 54.3
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.7e-33 148.7 160 56.2
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 2.2e-33 148.3 115 67.0
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 2.2e-33 148.3 651 71.6
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 2.2e-33 148.3 132 61.4
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 3.8e-33 147.5 117 65.0
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 8.4e-33 146.4 160 52.5
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 8.4e-33 146.4 144 55.6
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 8.4e-33 146.4 155 54.2
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.4e-32 145.6 653 77.9
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 1.4e-32 145.6 689 75.8
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 3.2e-32 144.4 141 53.9
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.2e-32 144.4 141 53.9
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.6e-31 142.1 121 61.2
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.7e-31 141.4 132 58.3
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 3.5e-31 141.0 138 55.1
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.6e-31 140.6 121 61.2
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 4.6e-31 140.6 157 52.2
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 6.1e-31 140.2 135 57.0
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 6.1e-31 140.2 148 56.1
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 6.1e-31 140.2 669 76.2
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 1.8e-30 138.7 135 56.3
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 1.8e-30 138.7 653 78.3
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 2.3e-30 138.3 650 78.5
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 6.7e-30 136.7 135 52.6
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 6.7e-30 136.7 135 57.0
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 1.1e-29 136.0 138 52.9
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.1e-29 136.0 130 54.6
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.1e-29 136.0 112 59.8
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 1.1e-29 136.0 651 76.0
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 1.5e-29 135.6 679 63.5
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 1.9e-29 135.2 152 48.7
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 1.9e-29 135.2 152 48.7
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 3.3e-29 134.4 130 53.8
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 3.3e-29 134.4 130 53.8
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 3.3e-29 134.4 130 53.8
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 4.3e-29 134.0 126 55.6
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 9.7e-29 132.9 135 56.3
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.6e-28 132.1 134 54.5
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 3.7e-28 131.0 649 76.4
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 4.8e-28 130.6 136 54.4
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.1e-27 129.4 142 55.6
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.1e-27 129.4 102 62.7
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 1.1e-27 129.4 135 54.1
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 1.1e-27 129.4 126 56.3
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.4e-27 129.0 119 57.1
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.8e-27 128.6 652 74.5
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 9.0e-27 126.3 155 49.0
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 9.0e-27 126.3 99 61.6
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 3.4e-26 124.4 635 76.9
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 5.9e-26 123.6 89 73.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.3e-25 122.5 140 50.0
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 1.1e-24 119.4 132 50.0
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.9e-24 118.6 92 66.3
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 4.2e-24 117.5 136 50.7
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 5.5e-24 117.1 147 46.9
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 7.2e-24 116.7 82 67.1
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 2.1e-23 115.2 88 63.6
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.7e-23 114.8 86 62.8
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 4.6e-23 114.0 100 58.0
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 4.6e-23 114.0 84 63.1
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.0e-22 112.8 165 41.8
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.0e-22 111.3 72 77.8
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 5.7e-21 107.1 89 55.1
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 2.8e-20 104.8 101 50.5
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.7e-20 104.4 72 73.6
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 8.2e-20 103.2 93 55.9
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.8e-19 102.1 111 49.5
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.8e-19 102.1 141 45.4
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 4.1e-19 100.9 141 44.7
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 9.1e-19 99.8 134 42.5
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.4e-16 92.4 93 53.8
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 9.4e-16 89.7 64 65.6
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 2.8e-12 78.2 91 46.2
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 2.8e-12 78.2 91 46.2
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 4.8e-12 77.4 89 39.3
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 6.3e-12 77.0 61 62.3
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.2e-10 72.8 57 61.4
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.3e-09 69.3 50 68.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 2.2e-09 68.6 54 61.1
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 6.1e-07 60.5 164 27.4
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.0e-06 59.7 97 36.1
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 3.9e-06 57.8 149 26.8


User provided reference genes

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