Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g05190 Coffea canephora HOM05D005342 ORTHO05D006925 2.5e-59 231.9 116 100.0
Dinv11757 Davidia involucrata HOM05D005342 ORTHO05D006925 5.7e-51 204.1 112 88.4
Potri.001G160800 Populus trichocarpa HOM05D005342 ORTHO05D006925 6.3e-50 200.7 112 85.7
SalBow8G1060 Salvia bowleyana HOM05D005342 ORTHO05D006925 6.3e-50 200.7 112 83.9
GSVIVG01012146001 Vitis vinifera HOM05D005342 ORTHO05D006925 6.3e-50 200.7 112 85.7
Migut.M02010 Erythranthe guttata HOM05D005342 ORTHO05D006925 8.2e-50 200.3 114 85.1
Haze_05265 Corylus avellana HOM05D005342 ORTHO05D006925 1.1e-49 199.9 112 87.5
Gohir.A01G185820 Gossypium hirsutum HOM05D005342 ORTHO05D006925 1.8e-49 199.1 114 85.1
Gorai.002G218700 Gossypium raimondii HOM05D005342 ORTHO05D006925 1.8e-49 199.1 114 85.1
Hund19384 Selenicereus undatus HOM05D005342 ORTHO05D006925 1.8e-49 199.1 112 85.7
DCAR_001275 Daucus carota HOM05D005342 ORTHO05D006925 2.4e-49 198.7 110 85.5
Prupe.4G117500 Prunus persica HOM05D005342 ORTHO05D006925 4.1e-49 198.0 111 86.5
Rhsim03G0048000 Rhododendron simsii HOM05D005342 ORTHO05D006925 4.1e-49 198.0 110 87.3
RcHm_v2.0_Chr5g0021061 Rosa chinensis HOM05D005342 ORTHO05D006925 5.3e-49 197.6 111 83.8
Thecc.02G004100 Theobroma cacao HOM05D005342 ORTHO05D006925 5.3e-49 197.6 114 85.1
Gohir.D01G176400 Gossypium hirsutum HOM05D005342 ORTHO05D006925 6.9e-49 197.2 114 84.2
TWI53G1312 Tripterygium wilfordii HOM05D005342 ORTHO05D006925 6.9e-49 197.2 112 84.8
Peaxi162Scf00520g00219 Petunia axillaris HOM05D005342 ORTHO05D006925 9.0e-49 196.8 114 84.2
AUR62020653 Chenopodium quinoa HOM05D005342 ORTHO05D006925 1.2e-48 196.4 112 83.9
Lj2A343T76 Lonicera japonica HOM05D005342 ORTHO05D006925 1.2e-48 196.4 107 86.9
SGA_v2.0_scaffold298G47707 Striga asiatica HOM05D005342 ORTHO05D006925 1.2e-48 196.4 108 88.0
CSS0011520 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 2.0e-48 195.7 112 84.8
CSS0036835 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 2.0e-48 195.7 112 84.8
CiPaw.09G137700 Carya illinoinensis HOM05D005342 ORTHO05D006925 2.0e-48 195.7 112 85.7
FAN21G1494 Fragaria x ananassa HOM05D005342 ORTHO05D006925 2.0e-48 195.7 114 79.8
MD10G1227500 Malus domestica HOM05D005342 ORTHO05D006925 2.0e-48 195.7 110 87.3
Manes.03G075200 Manihot esculenta HOM05D005342 ORTHO05D006925 2.6e-48 195.3 111 84.7
CANSAT35G0196 Cannabis sativa HOM05D005342 ORTHO05D006925 3.4e-48 194.9 112 83.9
Sabra01G0131500 Salix brachista HOM05D005342 ORTHO05D006925 3.4e-48 194.9 109 84.4
Ca_26328_v3 Cicer arietinum L. HOM05D005342 ORTHO05D006925 4.5e-48 194.5 112 82.1
Psat6g050320 Pisum sativum HOM05D005342 ORTHO05D006925 4.5e-48 194.5 112 82.1
Aa31LG9G16230 Aethionema arabicum HOM05D005342 ORTHO05D006925 5.9e-48 194.1 112 82.1
MSTRG.16371 Avicennia marina HOM05D005342 ORTHO05D006925 5.9e-48 194.1 112 83.0
Ciclev10015344m.g Citrus clementina HOM05D005342 ORTHO05D006925 5.9e-48 194.1 114 82.5
HanXRQChr05g0148741 Helianthus annuus HOM05D005342 ORTHO05D006925 5.9e-48 194.1 112 81.2
ECA246G2798 Erigeron canadensis HOM05D005342 ORTHO05D006925 7.7e-48 193.7 112 80.4
FvH4_3g12950 Fragaria vesca HOM05D005342 ORTHO05D006925 7.7e-48 193.7 111 82.0
FAN16G1572 Fragaria x ananassa HOM05D005342 ORTHO05D006925 7.7e-48 193.7 110 82.7
MELO3C007034.2 Cucumis melo HOM05D005342 ORTHO05D006925 1.0e-47 193.4 112 83.9
MD05G1246900 Malus domestica HOM05D005342 ORTHO05D006925 1.0e-47 193.4 110 86.4
FAN11G0369 Fragaria x ananassa HOM05D005342 ORTHO05D006925 1.3e-47 193.0 110 82.7
Rhsim03G0048600 Rhododendron simsii HOM05D005342 ORTHO05D006925 1.3e-47 193.0 107 86.9
ClCG01G025520 Citrullus lanatus HOM05D005342 ORTHO05D006925 1.7e-47 192.6 110 85.5
PGSC0003DMG400017735 Solanum tuberosum HOM05D005342 ORTHO05D006925 1.7e-47 192.6 114 80.7
CsaV3_6G052760 Cucumis sativus L. HOM05D005342 ORTHO05D006925 2.2e-47 192.2 112 83.0
Nitab4.5_0013176g0020 Nicotiana tabacum HOM05D005342 ORTHO05D006925 2.2e-47 192.2 112 83.0
arahy.Tifrunner.gnm1.ann1.T4IDLE Arachis hypogaea HOM05D005342 ORTHO05D006925 2.9e-47 191.8 110 83.6
Lsat_1_v5_gn_6_95820 Lactuca sativa HOM05D005342 ORTHO05D006925 2.9e-47 191.8 107 83.2
Sed0018199 Sechium edule HOM05D005342 ORTHO05D006925 3.8e-47 191.4 112 83.0
unitig_749.g13576 Utricularia gibba HOM05D005342 ORTHO05D006925 3.8e-47 191.4 114 78.9
arahy.Tifrunner.gnm1.ann1.EGN9M7 Arachis hypogaea HOM05D005342 ORTHO05D006925 6.5e-47 190.7 112 81.2
Solyc02g081660.3 Solanum lycopersicum HOM05D005342 ORTHO05D006925 6.5e-47 190.7 114 79.8
Sopen02g026270 Solanum pennellii HOM05D005342 ORTHO05D006925 6.5e-47 190.7 114 79.8
TPR.G34568 Trifolium pratense HOM05D005342 ORTHO05D006925 6.5e-47 190.7 112 79.5
Lalb_Chr10g0095551 Lupinus albus HOM05D005342 ORTHO05D006925 8.5e-47 190.3 112 81.2
Rhsim05G0150700 Rhododendron simsii HOM05D005342 ORTHO05D006925 8.5e-47 190.3 106 85.8
vmacro21284 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 8.5e-47 190.3 105 86.7
Lj2g0003117 Lotus japonicus HOM05D005342 ORTHO05D006925 1.1e-46 189.9 112 81.2
Medtr5g020440 Medicago truncatula HOM05D005342 ORTHO05D006925 1.1e-46 189.9 112 79.5
Atru.chr10.349 Acer truncatum HOM05D005342 ORTHO05D006925 1.9e-46 189.1 112 80.4
CAN.G809.68 Capsicum annuum HOM05D005342 ORTHO05D006925 1.9e-46 189.1 111 82.0
Medtr6g024095 Medicago truncatula HOM05D005342 ORTHO05D006925 1.9e-46 189.1 112 79.5
Atru.chr10.317 Acer truncatum HOM05D005342 ORTHO05D006925 3.2e-46 188.3 112 79.5
Carub.0001s2937 Capsella rubella HOM05D005342 ORTHO05D006925 3.2e-46 188.3 111 81.1
FAN25G1408 Fragaria x ananassa HOM05D005342 ORTHO05D006925 3.2e-46 188.3 114 77.2
Glyma.07G173800 Glycine max HOM05D005342 ORTHO05D006925 3.2e-46 188.3 114 79.8
Os08g0207600 Oryza sativa ssp. japonica HOM05D005342 ORTHO05D006925 5.5e-46 187.6 111 79.3
TAR626G0514 Trochodendron aralioides HOM05D005342 ORTHO05D006925 5.5e-46 187.6 111 78.4
AL1G45370 Arabidopsis lyrata HOM05D005342 ORTHO05D006925 9.4e-46 186.8 111 81.1
Sp1g26820 Schrenkiella parvula HOM05D005342 ORTHO05D006925 9.4e-46 186.8 111 80.2
AT1G30960 Arabidopsis thaliana HOM05D005342 ORTHO05D006925 1.6e-45 186.0 111 80.2
BcaB07g32756 Brassica carinata HOM05D005342 ORTHO05D006925 2.1e-45 185.7 111 79.3
A09p35250 Brassica napus HOM05D005342 ORTHO05D006925 2.1e-45 185.7 111 79.3
BolC5t31751H Brassica oleracea HOM05D005342 ORTHO05D006925 2.1e-45 185.7 111 79.3
BraA09t39052Z Brassica rapa HOM05D005342 ORTHO05D006925 2.1e-45 185.7 111 79.3
CARHR030500 Cardamine hirsuta HOM05D005342 ORTHO05D006925 2.1e-45 185.7 111 80.2
Nn2g13664 Nelumbo nucifera HOM05D005342 ORTHO05D006925 2.1e-45 185.7 112 81.2
A07p09560 Brassica napus HOM05D005342 ORTHO05D006925 2.7e-45 185.3 111 79.3
C07p14720 Brassica napus HOM05D005342 ORTHO05D006925 2.7e-45 185.3 111 79.3
BolC7t41974H Brassica oleracea HOM05D005342 ORTHO05D006925 2.7e-45 185.3 111 79.3
BraA07t28750Z Brassica rapa HOM05D005342 ORTHO05D006925 2.7e-45 185.3 111 79.3
Eucgr.D00013 Eucalyptus grandis HOM05D005342 ORTHO05D006925 3.6e-45 184.9 112 80.4
Phvul.003G015000 Phaseolus vulgaris HOM05D005342 ORTHO05D006925 4.6e-45 184.5 114 76.3
CDE03G0515 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 6.1e-45 184.1 111 77.5
Thhalv10007654m.g Eutrema salsugineum HOM05D005342 ORTHO05D006925 7.9e-45 183.7 111 79.3
PSO017G0115 Papaver somniferum HOM05D005342 ORTHO05D006925 7.9e-45 183.7 111 75.7
PSO063G2198 Papaver somniferum HOM05D005342 ORTHO05D006925 7.9e-45 183.7 111 75.7
HPP92_001898 Vanilla planifolia HOM05D005342 ORTHO05D006925 7.9e-45 183.7 110 77.3
EL10Ac2g03680 Beta vulgaris HOM05D005342 ORTHO05D006925 1.0e-44 183.3 131 71.8
BcaC05g27129 Brassica carinata HOM05D005342 ORTHO05D006925 1.4e-44 183.0 111 78.4
C05p30140 Brassica napus HOM05D005342 ORTHO05D006925 1.4e-44 183.0 111 78.4
HPP92_001865 Vanilla planifolia HOM05D005342 ORTHO05D006925 1.8e-44 182.6 110 77.3
Medtr1g033240 Medicago truncatula HOM05D005342 ORTHO05D006925 6.7e-44 180.6 112 76.8
PGR004G0306 Punica granatum HOM05D005342 ORTHO05D006925 6.7e-44 180.6 112 76.8
Zm00001eb171110 Zea mays HOM05D005342 ORTHO05D006925 8.8e-44 180.3 111 76.6
THA.LOC104814325 Tarenaya hassleriana HOM05D005342 ORTHO05D006925 1.1e-43 179.9 111 78.4
Aqoxy1G01397 Aquilegia oxysepala HOM05D005342 ORTHO05D006925 2.5e-43 178.7 111 77.5
ATR0763G223 Amborella trichopoda HOM05D005342 ORTHO05D006925 4.3e-43 177.9 112 73.2
SHI17083 Sapria himalayana HOM05D005342 ORTHO05D006925 7.4e-43 177.2 107 76.6
Cfa001127 Carpinus fangiana HOM05D005342 ORTHO05D006925 9.7e-43 176.8 116 77.6
Dinv36886 Davidia involucrata HOM05D005342 ORTHO05D006925 3.7e-42 174.9 96 86.5
Actinidia37827 Actinidia chinensis HOM05D005342 ORTHO05D006925 1.4e-38 162.9 112 77.7
QL11p012260 Quercus lobata HOM05D005342 ORTHO05D006925 2.6e-35 152.1 87 82.8
Cpa.g.sc1627.2 Carica papaya HOM05D005342 ORTHO05D006925 9.7e-35 150.2 85 82.4
Ah.11g044120 Amaranthus hybridus HOM05D005342 ORTHO05D006925 6.3e-34 147.5 83 83.1
AUR62038720 Chenopodium quinoa HOM05D005342 ORTHO05D006925 1.4e-33 146.4 87 78.2
AUR62043831 Chenopodium quinoa HOM05D005342 ORTHO05D006925 9.1e-33 143.7 84 79.8
CDE06G1455 Ceratophyllum demersum HOM05D005342 ORTHO05D006925 2.0e-32 142.5 85 75.3
Prupe.4G117700 Prunus persica HOM05D005342 ORTHO05D006925 4.5e-32 141.4 101 71.3
CSS0009297 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 3.8e-31 138.3 85 80.0
CSS0007057 Camellia sinensis var. sinensis HOM05D005342 ORTHO05D006925 2.5e-30 135.6 85 78.8
Duzib132G0347 Durio zibethinus HOM05D005342 ORTHO05D006925 1.6e-29 132.9 79 83.5
SGA_v2.0_scaffold175G39327 Striga asiatica HOM05D005342 ORTHO05D006925 2.0e-24 115.9 74 77.0
SMO347G0253 Selaginella moellendorffii HOM05D005342 ORTHO05D006925 9.4e-22 107.1 112 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2515 Anthoceros agrestis HOM05D005342 ORTHO05D006925 3.0e-20 102.1 111 43.2
Pp3c8_14960 Physcomitrium patens HOM05D005342 ORTHO05D006925 2.6e-19 99.0 110 42.7
Mapoly0029s0109 Marchantia polymorpha HOM05D005342 ORTHO05D006925 1.3e-18 96.7 110 40.9
vmacro07644 Vaccinium macrocarpon HOM05D005342 ORTHO05D006925 5.3e-17 91.3 51 84.3
MCO16G643 Micromonas commoda HOM05D005342 ORTHO05D006925 2.0e-16 89.4 107 40.2
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 5.9e-16 87.8 108 38.0
Sc17g0004080 Simmondsia chinensis HOM05D005342 ORTHO05D006925 1.3e-10 70.1 38 81.6
BolC8t48183H Brassica oleracea HOM05D005342 ORTHO05D042222 3.8e-07 58.5 38 71.1
BcaB04g18195 Brassica carinata HOM05D005342 ORTHO05D006925 8.6e-07 57.4 34 70.6
A08p10870 Brassica napus HOM05D005342 ORTHO05D042222 4.2e-06 55.1 37 67.6


User provided reference genes

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