Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 4.5e-85 317.8 150 100.0
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.2e-50 203.4 136 69.1
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.4e-49 199.9 141 65.2
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 2.4e-49 199.1 137 66.4
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 6.9e-49 197.6 141 62.4
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 3.2e-46 188.7 139 62.6
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 2.1e-45 186.0 141 61.7
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 7.8e-45 184.1 138 61.6
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.0e-44 183.7 128 64.8
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 1.0e-44 183.7 146 61.0
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.3e-44 183.3 139 64.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.3e-44 183.3 139 64.0
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 3.9e-44 181.8 144 59.0
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 8.7e-44 180.6 140 61.4
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.5e-43 179.9 133 62.4
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.9e-43 179.5 144 60.4
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 4.3e-43 178.3 149 57.7
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 7.3e-43 177.6 141 58.9
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 1.3e-42 176.8 140 58.6
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 1.6e-42 176.4 142 60.6
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.6e-42 176.4 167 53.3
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 2.1e-42 176.0 143 58.7
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 2.1e-42 176.0 140 59.3
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 2.1e-42 176.0 130 63.1
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 2.8e-42 175.6 141 59.6
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 2.8e-42 175.6 145 59.3
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 3.6e-42 175.3 143 60.1
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 3.6e-42 175.3 142 61.3
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 4.8e-42 174.9 140 59.3
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 6.2e-42 174.5 137 59.9
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 1.8e-41 172.9 137 62.0
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.8e-41 172.9 134 59.7
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.8e-41 172.9 126 64.3
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 3.1e-41 172.2 145 58.6
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 3.1e-41 172.2 122 65.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 5.3e-41 171.4 144 59.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 6.9e-41 171.0 146 56.8
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 9.0e-41 170.6 128 64.1
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.2e-40 170.2 141 60.3
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.2e-40 170.2 142 57.7
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 2.0e-40 169.5 141 58.2
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 7.6e-40 167.5 143 59.4
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 9.9e-40 167.2 146 53.4
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 9.9e-40 167.2 133 63.2
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 9.9e-40 167.2 133 63.2
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 9.9e-40 167.2 147 57.8
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 1.3e-39 166.8 144 56.2
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.3e-39 166.8 121 62.8
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.3e-39 166.8 140 57.9
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 6.4e-39 164.5 128 60.2
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 8.4e-39 164.1 137 59.9
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 8.4e-39 164.1 141 59.6
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 1.9e-38 162.9 123 61.0
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 9.3e-38 160.6 122 61.5
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 9.3e-38 160.6 122 61.5
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.2e-37 160.2 151 55.0
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 1.2e-37 160.2 122 60.7
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.6e-37 159.8 133 60.9
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 2.1e-37 159.5 122 60.7
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 4.6e-37 158.3 139 56.1
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 4.6e-37 158.3 137 56.9
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.0e-36 157.1 114 61.4
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 1.0e-36 157.1 146 53.4
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 1.0e-36 157.1 146 53.4
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.0e-36 157.1 126 57.1
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.3e-36 156.0 120 60.0
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 5.6e-35 151.4 147 49.7
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 4.8e-34 148.3 118 58.5
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 8.1e-34 147.5 160 48.1
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 1.4e-33 146.7 120 57.5
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.4e-33 146.0 125 56.0
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 4.0e-33 145.2 116 59.5
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.0e-33 145.2 116 59.5
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.0e-33 145.2 116 59.5
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 3.4e-32 142.1 140 49.3
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 2.2e-31 139.4 147 49.7
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 4.9e-31 138.3 111 57.7
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 1.1e-30 137.1 68 86.8
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.4e-30 136.7 117 58.1
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.9e-30 136.3 123 52.8
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.2e-30 135.6 121 50.4
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 7.1e-30 134.4 125 54.4
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 1.6e-29 133.3 123 52.0
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.3e-28 129.4 97 60.8
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.1e-27 127.1 133 47.4
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 3.3e-27 125.6 64 82.8
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 6.9e-25 117.9 157 39.5
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 9.0e-25 117.5 96 55.2
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 4.5e-24 115.2 123 51.2
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 7.6e-24 114.4 77 66.2
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.9e-22 109.8 120 46.7
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 3.2e-22 109.0 140 42.9
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.2e-22 109.0 119 47.1
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 1.0e-20 104.0 109 48.6
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.8e-20 103.2 102 50.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.5e-19 100.1 60 66.7
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 3.2e-14 82.4 84 47.6
Hund08906 Selenicereus undatus HOM05D000903 ORTHO05D000731 3.8e-07 58.9 99 37.4
Lj4g0011716 Lotus japonicus HOM05D000903 ORTHO05D000731 1.9e-06 56.6 90 35.6
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 2.5e-06 56.2 73 37.0
Ca_21343_v3 Cicer arietinum L. HOM05D000903 ORTHO05D000731 3.2e-06 55.8 105 34.3
Ca_21392_v3 Cicer arietinum L. HOM05D000903 ORTHO05D000731 3.2e-06 55.8 105 34.3
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 3.2e-06 55.8 52 48.1
Sc18g0002870 Simmondsia chinensis HOM05D000903 ORTHO05D000731 4.2e-06 55.5 60 45.0
SGA_v2.0_scaffold4G02095 Striga asiatica HOM05D000903 ORTHO05D000731 5.5e-06 55.1 64 45.3


User provided reference genes

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