Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.7e-70 269.2 137 100.0
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 5.3e-48 194.5 137 73.0
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.5e-47 193.0 137 71.5
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 7.2e-45 184.1 138 68.1
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.6e-44 183.0 137 66.4
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 2.1e-44 182.6 136 66.9
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 2.1e-44 182.6 136 69.1
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 3.6e-44 181.8 135 66.7
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 7.9e-44 180.6 137 65.7
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 3.0e-43 178.7 135 64.4
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 3.9e-43 178.3 135 68.1
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 3.9e-43 178.3 138 65.2
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 5.1e-43 177.9 137 62.0
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 5.1e-43 177.9 137 62.0
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 6.7e-43 177.6 136 69.1
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 8.8e-43 177.2 139 64.0
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.1e-42 176.8 136 67.6
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 1.1e-42 176.8 133 66.2
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 2.0e-42 176.0 133 65.4
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.0e-42 176.0 133 65.4
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.5e-42 175.6 121 72.7
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 2.5e-42 175.6 133 64.7
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 4.3e-42 174.9 138 64.5
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 4.3e-42 174.9 137 63.5
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.3e-42 174.9 134 64.2
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 9.7e-42 173.7 135 64.4
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 1.3e-41 173.3 137 62.8
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 1.3e-41 173.3 135 65.2
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 1.7e-41 172.9 137 63.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.2e-41 172.6 137 61.3
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 2.2e-41 172.6 135 64.4
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 2.8e-41 172.2 137 62.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 4.8e-41 171.4 133 65.4
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 6.3e-41 171.0 134 64.2
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 6.3e-41 171.0 134 64.2
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 1.1e-40 170.2 134 64.9
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 2.4e-40 169.1 135 64.4
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 3.1e-40 168.7 124 68.5
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 5.3e-40 167.9 135 62.2
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 1.2e-39 166.8 124 66.9
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 3.4e-39 165.2 131 65.6
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 5.9e-39 164.5 121 66.9
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 7.7e-39 164.1 120 67.5
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.0e-38 163.7 128 61.7
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 1.3e-38 163.3 136 60.3
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.7e-38 162.9 121 66.1
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 8.5e-38 160.6 126 62.7
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 8.5e-38 160.6 112 70.5
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 8.5e-38 160.6 136 59.6
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 3.2e-37 158.7 133 61.7
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 7.2e-37 157.5 133 60.9
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 7.2e-37 157.5 133 60.9
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 9.4e-37 157.1 135 59.3
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.2e-36 156.8 120 65.8
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 1.2e-36 156.8 132 62.9
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 1.6e-36 156.4 135 59.3
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.6e-36 156.4 98 76.5
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 2.7e-36 155.6 131 61.8
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 7.9e-36 154.1 135 58.5
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 1.0e-35 153.7 126 60.3
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.0e-35 153.7 126 61.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 1.4e-35 153.3 131 61.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.8e-35 152.9 129 60.5
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.8e-35 152.9 131 61.8
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.3e-35 152.5 131 61.1
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 2.3e-35 152.5 137 59.1
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 3.9e-35 151.8 135 61.5
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 8.8e-35 150.6 130 59.2
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 8.8e-35 150.6 133 57.9
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.5e-34 149.8 127 60.6
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 2.0e-34 149.4 128 60.2
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 2.6e-34 149.1 129 58.9
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 3.3e-34 148.7 133 57.1
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 4.4e-34 148.3 133 57.9
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 7.4e-34 147.5 128 60.9
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 9.7e-34 147.1 141 56.0
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 1.3e-33 146.7 131 58.0
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.3e-33 146.7 133 56.4
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.7e-33 146.4 125 56.8
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 3.7e-33 145.2 135 56.3
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 3.7e-33 145.2 105 65.7
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 8.2e-33 144.1 133 54.9
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 8.2e-33 144.1 133 54.9
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.1e-32 143.7 115 64.3
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 2.4e-32 142.5 126 56.3
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 9.1e-32 140.6 138 55.8
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.2e-31 140.2 133 55.6
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.2e-31 140.2 133 55.6
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.6e-31 139.0 134 54.5
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.5e-31 138.3 137 54.0
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 5.9e-31 137.9 99 64.6
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 1.1e-29 133.7 185 44.9
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 4.2e-29 131.7 139 52.5
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 2.1e-28 129.4 113 58.4
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 8.0e-28 127.5 111 60.4
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 1.4e-27 126.7 101 61.4
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.1e-26 123.6 120 56.7
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 5.7e-26 121.3 92 63.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 2.2e-25 119.4 126 52.4
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 2.0e-23 112.8 89 61.8
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 4.5e-23 111.7 147 46.3
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 3.8e-22 108.6 105 54.3
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 3.2e-21 105.5 132 47.7
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 3.6e-20 102.1 88 62.5
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.3e-19 99.4 89 58.4
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 1.7e-17 93.2 112 49.1
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 2.2e-17 92.8 97 55.7
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 2.4e-16 89.4 81 56.8
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 8.5e-14 80.9 49 75.5
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 5.5e-13 78.2 104 41.3
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 9.4e-13 77.4 75 54.7
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 4.8e-09 65.1 113 37.2
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 1.2e-07 60.5 76 46.1


User provided reference genes

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