Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.9e-153 545.8 271 100.0
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 3.9e-95 352.1 234 73.1
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 7.4e-94 347.8 209 77.5
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 7.4e-94 347.8 209 77.5
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.7e-93 345.5 249 67.5
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 6.9e-92 341.3 256 66.8
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.2e-91 340.5 254 65.4
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.7e-90 336.7 218 72.0
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 3.8e-90 335.5 231 70.1
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 5.0e-90 335.1 245 68.2
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 6.5e-90 334.7 246 66.7
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 6.5e-90 334.7 214 75.2
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.5e-89 332.8 213 73.7
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 3.2e-89 332.4 211 73.0
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 2.1e-88 329.7 227 69.2
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 6.1e-88 328.2 225 70.7
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 5.1e-87 325.1 271 61.6
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.1e-86 323.9 227 68.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 2.0e-86 323.2 239 65.3
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 4.4e-86 322.0 251 64.1
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 5.7e-86 321.6 233 65.2
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.3e-85 320.5 221 68.3
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.3e-85 320.5 236 66.1
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.3e-85 320.5 237 65.4
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.7e-85 320.1 251 63.7
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 2.2e-85 319.7 237 65.4
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.2e-85 319.7 216 68.5
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.2e-85 319.7 253 63.6
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 2.2e-85 319.7 212 71.2
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.8e-85 319.3 216 71.8
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 3.7e-85 318.9 245 63.7
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 3.7e-85 318.9 249 64.7
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 4.8e-85 318.5 225 68.0
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 4.8e-85 318.5 216 68.5
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 6.3e-85 318.2 237 65.4
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 8.2e-85 317.8 226 65.0
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.8e-84 316.6 232 66.8
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 1.8e-84 316.6 206 70.9
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.4e-84 316.2 209 70.8
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 5.3e-84 315.1 222 67.6
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.5e-83 313.5 253 60.1
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.5e-83 313.5 224 67.0
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 2.6e-83 312.8 255 60.0
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 4.5e-83 312.0 257 59.9
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 7.7e-83 311.2 198 72.7
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.0e-82 310.8 253 59.7
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.7e-82 310.1 265 61.1
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 2.2e-82 309.7 198 71.7
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 2.2e-82 309.7 228 64.5
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 3.8e-82 308.9 236 61.4
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.8e-82 308.9 198 71.7
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 5.0e-82 308.5 198 71.2
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 5.0e-82 308.5 234 62.8
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 5.0e-82 308.5 242 59.9
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 8.5e-82 307.8 236 61.0
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 8.5e-82 307.8 214 67.3
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.1e-81 307.4 245 62.9
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.2e-81 305.8 250 60.4
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 7.2e-81 304.7 242 62.0
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 7.2e-81 304.7 222 64.9
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.2e-80 303.9 214 69.2
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.2e-80 303.9 221 67.0
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 3.6e-80 302.4 198 72.2
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.4e-79 300.4 249 58.6
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 1.8e-79 300.1 230 63.5
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 5.2e-79 298.5 212 65.6
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 6.7e-79 298.1 263 57.8
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.8e-79 297.7 226 64.6
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 8.8e-79 297.7 215 66.0
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.0e-78 296.6 229 64.2
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 2.6e-78 296.2 221 63.3
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 4.4e-78 295.4 256 58.2
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.3e-77 293.9 221 64.3
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 8.2e-77 291.2 215 66.5
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 9.1e-76 287.7 223 63.7
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.2e-75 287.3 232 62.5
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.3e-74 283.9 196 67.9
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 2.7e-72 276.2 169 74.0
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.6e-72 275.8 216 63.0
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 4.7e-72 275.4 217 62.7
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.8e-71 273.5 184 70.7
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 3.7e-69 265.8 249 58.2
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 6.3e-69 265.0 216 59.7
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.1e-68 264.2 216 59.3
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 8.5e-66 254.6 195 61.0
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 1.1e-65 254.2 185 64.9
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.6e-64 250.4 168 66.7
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 3.6e-64 249.2 227 52.4
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.2e-62 244.2 133 84.2
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.0e-62 243.4 210 60.5
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 6.3e-61 238.4 193 57.0
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 8.3e-61 238.0 198 56.1
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.2e-59 234.2 156 72.4
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.0e-58 231.1 161 67.7
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.5e-57 226.5 168 63.1
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 1.2e-56 224.2 157 70.1
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 6.6e-50 201.8 258 45.7
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 8.6e-50 201.4 202 49.0
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 8.6e-50 201.4 121 76.9
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 1.1e-44 184.5 123 67.5
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 2.1e-40 170.2 104 70.2
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 3.1e-39 166.4 235 40.0
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 7.0e-36 155.2 144 52.1
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 2.7e-35 153.3 182 40.1
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 6.2e-32 142.1 94 68.1
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.4e-30 136.0 81 76.5
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 9.5e-25 118.2 92 63.0
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 4.2e-20 102.8 75 65.3
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 5.6e-17 92.4 60 71.7
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 4.7e-16 89.4 53 75.5
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.1e-15 88.2 54 72.2
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.1e-15 86.7 81 58.0
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 2.0e-14 84.0 83 51.8
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 1.7e-10 70.9 54 59.3
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 5.1e-10 69.3 96 40.6
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 5.1e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 5.1e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 5.1e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.5e-09 67.8 90 42.2
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.5e-09 67.8 65 49.2
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 1.2e-06 58.2 33 75.8


User provided reference genes

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