Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.3e-53 212.6 95 100.0
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.8e-26 122.5 75 66.7
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 9.7e-25 116.7 62 72.6
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.3e-24 116.3 62 71.0
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 3.7e-24 114.8 62 71.0
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 4.8e-24 114.4 65 69.2
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 4.8e-24 114.4 63 66.7
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 6.3e-24 114.0 62 71.0
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 8.2e-24 113.6 65 72.3
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 8.2e-24 113.6 65 69.2
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 8.2e-24 113.6 78 56.4
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.4e-23 112.8 63 69.8
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-23 112.8 63 69.8
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.4e-23 112.8 63 69.8
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.4e-23 112.1 63 69.8
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.4e-23 112.1 65 64.6
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 3.1e-23 111.7 63 68.3
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 3.1e-23 111.7 63 63.5
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.1e-23 111.7 62 71.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 4.1e-23 111.3 63 69.8
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 5.3e-23 110.9 75 64.0
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 5.3e-23 110.9 63 66.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 7.0e-23 110.5 59 71.2
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 9.1e-23 110.2 65 63.1
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.2e-22 109.8 84 54.8
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.2e-22 109.8 84 54.8
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.2e-22 109.8 73 60.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.2e-22 109.8 63 66.7
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.2e-22 109.8 63 66.7
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.2e-22 109.8 63 66.7
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.2e-22 109.8 63 66.7
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.6e-22 109.4 63 68.3
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.6e-22 109.4 63 66.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.6e-22 109.4 65 64.6
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.6e-22 109.4 65 63.1
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.6e-22 109.4 85 54.1
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.6e-22 109.4 63 65.1
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.0e-22 109.0 63 63.5
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.0e-22 109.0 63 68.3
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 2.0e-22 109.0 63 66.7
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.0e-22 109.0 63 69.8
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.0e-22 109.0 63 65.1
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 2.7e-22 108.6 63 66.7
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.7e-22 108.6 73 63.0
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.7e-22 108.6 69 58.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 2.7e-22 108.6 85 52.9
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 3.5e-22 108.2 64 64.1
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 3.5e-22 108.2 63 66.7
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 3.5e-22 108.2 63 65.1
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.5e-22 108.2 63 63.5
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 4.5e-22 107.8 63 63.5
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 4.5e-22 107.8 57 71.9
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 5.9e-22 107.5 63 61.9
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 5.9e-22 107.5 63 63.5
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 5.9e-22 107.5 63 63.5
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 5.9e-22 107.5 63 63.5
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 5.9e-22 107.5 63 61.9
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 7.7e-22 107.1 63 61.9
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.0e-21 106.7 63 65.1
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.0e-21 106.7 63 63.5
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.0e-21 106.7 63 63.5
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.0e-21 106.7 57 70.2
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.3e-21 106.3 71 57.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.7e-21 105.9 63 63.5
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.2e-21 105.5 63 63.5
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 2.2e-21 105.5 62 66.1
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.2e-21 105.5 63 61.9
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 3.8e-21 104.8 63 61.9
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 3.8e-21 104.8 62 62.9
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 3.8e-21 104.8 63 60.3
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.0e-21 104.4 63 60.3
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 5.0e-21 104.4 57 68.4
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 6.5e-21 104.0 63 58.7
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 6.5e-21 104.0 63 60.3
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.1e-20 103.2 63 60.3
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.9e-20 102.4 58 63.8
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.2e-20 101.7 65 60.0
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 5.5e-20 100.9 63 60.3
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 9.4e-20 100.1 63 57.1
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.7e-19 98.6 63 61.9
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.7e-19 97.8 65 61.5
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.8e-18 95.9 58 62.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.0e-18 95.1 65 55.4
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.2e-18 94.4 65 55.4
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 8.8e-18 93.6 63 55.6
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 2.0e-17 92.4 69 58.0
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 2.0e-17 92.4 69 58.0
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 5.7e-17 90.9 67 56.7
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 5.7e-17 90.9 67 56.7
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 7.5e-17 90.5 54 64.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.7e-16 89.4 49 65.3
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 3.7e-16 88.2 49 65.3
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.7e-16 88.2 63 50.8
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.3e-16 87.4 47 68.1
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 1.4e-15 86.3 59 54.2
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 4.1e-15 84.7 50 64.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 5.4e-15 84.3 58 62.1
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 7.0e-15 84.0 49 65.3
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.2e-14 83.2 43 67.4
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 2.0e-14 82.4 48 62.5
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.0e-14 82.4 50 62.0
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.7e-14 82.0 76 47.4
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 3.5e-14 81.6 82 42.7
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 4.5e-14 81.3 60 53.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 4.5e-14 81.3 60 53.3
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.0e-13 80.1 49 59.2
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 3.2e-12 75.1 42 69.0
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 2.8e-08 62.0 62 41.9
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 8.3e-08 60.5 59 40.7


User provided reference genes

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