Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 5.8e-86 320.9 163 100.0
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.2e-43 180.3 158 64.6
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 2.3e-42 176.0 156 64.7
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 8.3e-40 167.5 121 67.8
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 2.4e-39 166.0 165 58.2
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 5.3e-39 164.9 151 60.3
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 2.7e-38 162.5 151 60.3
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 4.5e-38 161.8 159 55.3
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 5.9e-38 161.4 170 57.1
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 1.3e-37 160.2 162 58.6
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.3e-37 160.2 150 63.3
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.7e-37 159.8 169 55.0
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 2.2e-37 159.5 163 55.8
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.8e-37 158.7 152 57.9
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 5.0e-37 158.3 150 62.7
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 5.0e-37 158.3 160 55.6
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 6.5e-37 157.9 136 59.6
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 8.5e-37 157.5 150 56.7
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.5e-36 156.8 154 52.6
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 3.2e-36 155.6 160 58.1
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 4.2e-36 155.2 168 54.8
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 4.2e-36 155.2 146 54.8
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 5.5e-36 154.8 157 55.4
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 5.5e-36 154.8 162 58.0
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 7.2e-36 154.5 154 52.6
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 7.2e-36 154.5 109 68.8
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 7.2e-36 154.5 155 56.8
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 7.2e-36 154.5 165 54.5
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 9.4e-36 154.1 110 65.5
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 9.4e-36 154.1 161 55.9
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 9.4e-36 154.1 161 55.9
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 9.4e-36 154.1 159 53.5
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.2e-35 153.7 162 57.4
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.1e-35 152.9 154 52.6
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 2.1e-35 152.9 153 55.6
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 2.1e-35 152.9 111 67.6
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 2.1e-35 152.9 164 54.3
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 2.7e-35 152.5 168 55.4
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.6e-35 152.1 154 52.6
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 4.7e-35 151.8 163 50.9
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 6.1e-35 151.4 111 70.3
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 1.0e-34 150.6 111 64.0
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.4e-34 150.2 150 52.7
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 3.0e-34 149.1 104 67.3
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 5.2e-34 148.3 160 55.0
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 6.8e-34 147.9 109 65.1
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 8.8e-34 147.5 165 52.1
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.2e-33 147.1 109 64.2
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 1.5e-33 146.7 164 54.9
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.5e-33 146.7 152 52.0
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.0e-33 146.4 161 53.4
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 2.0e-33 146.4 106 68.9
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 5.7e-33 144.8 109 63.3
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 9.8e-33 144.1 145 53.1
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.3e-32 143.7 176 50.6
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.7e-32 143.3 100 70.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.8e-32 142.5 159 53.5
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 4.8e-32 141.7 115 61.7
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 6.3e-32 141.4 115 61.7
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 6.3e-32 141.4 148 54.7
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 8.3e-32 141.0 158 50.0
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 8.3e-32 141.0 158 50.6
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 8.3e-32 141.0 154 55.2
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.1e-31 140.6 127 59.1
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.4e-31 140.2 121 59.5
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.4e-31 140.2 148 52.0
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 1.4e-31 140.2 123 63.4
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 3.1e-31 139.0 148 53.4
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 3.1e-31 139.0 159 50.3
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 5.4e-31 138.3 158 49.4
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 7.0e-31 137.9 115 60.0
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 7.0e-31 137.9 115 60.0
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 7.0e-31 137.9 115 60.0
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 7.0e-31 137.9 109 62.4
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.0e-30 136.3 152 52.0
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 2.0e-30 136.3 158 48.7
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 4.5e-30 135.2 115 60.9
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 5.9e-30 134.8 165 49.7
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 1.3e-29 133.7 172 50.6
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 3.8e-29 132.1 123 57.7
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 1.5e-28 130.2 94 73.4
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 5.5e-28 128.3 132 54.5
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 9.5e-28 127.5 114 58.8
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 8.0e-27 124.4 166 48.2
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 4.0e-26 122.1 150 48.0
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 2.0e-25 119.8 117 58.1
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 7.5e-25 117.9 136 50.0
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 4.9e-24 115.2 119 56.3
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 6.3e-24 114.8 74 71.6
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 6.3e-24 114.8 116 50.9
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.8e-23 113.2 108 53.7
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 5.4e-23 111.7 108 52.8
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 9.2e-23 110.9 111 54.1
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 9.2e-23 110.9 145 45.5
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.5e-20 103.6 120 50.8
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 9.5e-20 100.9 121 45.5
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.6e-19 99.0 106 49.1
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 6.1e-19 98.2 65 73.8
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 8.0e-19 97.8 88 50.0
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 6.8e-18 94.7 83 57.8
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 9.8e-17 90.9 120 50.0
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.3e-16 90.5 62 75.8
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.4e-16 88.2 113 46.0
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.1e-15 87.4 67 68.7
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 4.6e-14 82.0 101 36.6
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 1.5e-12 77.0 64 50.0
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.2e-11 71.6 56 62.5
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.4e-09 65.9 45 68.9
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 4.9e-08 62.0 101 36.6
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.4e-08 61.6 73 46.6
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 3.2e-07 59.3 40 70.0


User provided reference genes

Program Settings