Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g02720 Coffea canephora HOM05D014857 ORTHO05D015078 0.0e+00 1183.7 612 100.0
PGSC0003DMG400002154 Solanum tuberosum HOM05D014857 ORTHO05D015078 1.0e-29 136.0 511 31.9
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 8.2e-24 116.3 471 31.8
Solyc06g005660.3 Solanum lycopersicum HOM05D014857 ORTHO05D015078 2.5e-20 104.8 569 28.5
Sopen06g001640 Solanum pennellii HOM05D014857 ORTHO05D015078 2.7e-19 101.3 573 28.8
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.4e-17 94.0 464 30.4
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.7e-16 92.0 469 30.9
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 8.2e-16 89.7 715 25.9
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 5.3e-15 87.0 458 30.8
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 7.0e-15 86.7 462 30.1
CSS0007490 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 9.1e-15 86.3 463 30.0
CSS0009096 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 5.9e-14 83.6 453 29.6
Lsat_1_v5_gn_9_68001 Lactuca sativa HOM05D014857 ORTHO05D015078 5.9e-14 83.6 404 28.2
CSS0047270 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.3e-13 82.4 461 29.9
DCAR_015272 Daucus carota HOM05D003265 ORTHO05D015078 2.5e-12 78.2 743 22.7
CSS0024766 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.7e-11 74.7 449 27.8
vmacro07090 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 6.1e-11 73.6 756 22.9
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.4e-10 72.4 458 28.6
ECA246G0591 Erigeron canadensis HOM05D014857 ORTHO05D015078 3.0e-10 71.2 378 25.4
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 8.8e-10 69.7 321 29.0
Oeu057239.1 Olea europaea HOM05D003265 ORTHO05D015078 1.5e-09 68.9 454 27.5
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 4.4e-09 67.4 146 34.2
Sc20g0002100 Simmondsia chinensis HOM05D030307 ORTHO05D026528 5.7e-09 67.0 255 31.0
Peaxi162Scf00122g00211 Petunia axillaris HOM05D014857 ORTHO05D015078 2.2e-08 65.1 621 25.1
Rhsim03G0122700 Rhododendron simsii HOM05D003265 ORTHO05D003819 2.2e-08 65.1 463 25.9
CSS0011554 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.8e-08 64.7 108 41.7
Nitab4.5_0000880g0010 Nicotiana tabacum HOM05D014857 ORTHO05D015078 3.7e-08 64.3 421 28.0
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.4e-07 62.4 163 35.0
Phvul.004G075600 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 1.8e-07 62.0 323 29.4
HanXRQChr09g0246531 Helianthus annuus HOM05D014857 ORTHO05D015078 4.1e-07 60.8 517 25.7
CSS0047156 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.6e-06 58.2 146 34.9
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 2.6e-06 58.2 151 32.5
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 3.5e-06 57.8 180 32.2
AUR62042920 Chenopodium quinoa HOM05D003265 ORTHO05D003819 4.5e-06 57.4 151 32.5
THA.LOC104806495 Tarenaya hassleriana HOM05D003265 ORTHO05D003819 4.5e-06 57.4 177 33.3
Nitab4.5_0000272g0020 Nicotiana tabacum HOM05D014857 ORTHO05D015078 5.9e-06 57.0 329 30.1


User provided reference genes

Program Settings