Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 3.2e-117 425.2 237 100.0
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 2.1e-84 316.2 241 67.6
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.8e-83 313.2 237 70.0
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.8e-83 313.2 237 69.6
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 2.6e-82 309.3 235 67.7
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 2.8e-81 305.8 237 66.2
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 4.8e-81 305.1 236 73.7
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 2.4e-80 302.8 235 66.8
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 2.4e-80 302.8 235 66.8
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 1.2e-79 300.4 235 66.8
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 2.0e-79 299.7 235 67.7
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 5.9e-79 298.1 238 72.3
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 2.9e-78 295.8 235 66.0
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 1.1e-77 293.9 216 69.9
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 1.1e-77 293.9 235 65.1
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 1.1e-77 293.9 240 64.2
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 1.9e-77 293.1 238 63.9
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 4.2e-77 292.0 236 64.8
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 2.7e-76 289.3 233 66.1
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 1.4e-75 287.0 236 64.4
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 1.4e-75 287.0 235 65.5
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 2.3e-75 286.2 236 63.6
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 6.7e-75 284.6 237 68.4
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 1.1e-74 283.9 243 65.8
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 2.6e-74 282.7 235 70.2
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 3.3e-74 282.3 241 65.6
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 1.7e-73 280.0 241 66.8
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 2.8e-73 279.3 237 65.8
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 8.2e-73 277.7 236 70.8
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 8.2e-73 277.7 237 65.4
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.4e-72 276.9 234 63.2
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 1.4e-72 276.9 233 62.2
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 1.8e-72 276.6 237 65.4
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 3.1e-72 275.8 226 64.2
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 3.1e-72 275.8 237 67.1
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 4.1e-72 275.4 236 65.3
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 5.3e-72 275.0 240 65.4
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 7.0e-72 274.6 235 68.9
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 9.1e-72 274.2 235 65.5
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 9.1e-72 274.2 234 69.2
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 1.2e-71 273.9 235 62.6
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 2.0e-71 273.1 230 68.7
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 2.0e-71 273.1 235 62.6
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 2.0e-71 273.1 230 69.6
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 2.6e-71 272.7 235 62.1
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 4.5e-71 271.9 237 67.5
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 4.5e-71 271.9 237 70.0
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 4.5e-71 271.9 235 63.4
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 5.9e-71 271.6 237 61.2
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 5.9e-71 271.6 236 62.7
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 7.7e-71 271.2 235 63.8
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 7.7e-71 271.2 235 66.4
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 7.7e-71 271.2 235 62.1
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 7.7e-71 271.2 235 61.7
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.7e-70 270.0 201 65.7
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 2.2e-70 269.6 240 59.2
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 2.5e-69 266.2 234 67.1
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 3.2e-69 265.8 235 64.3
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 3.2e-69 265.8 236 61.9
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 4.2e-69 265.4 224 63.8
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 4.2e-69 265.4 237 68.8
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 5.5e-69 265.0 191 78.5
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 7.2e-69 264.6 235 64.7
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 9.4e-69 264.2 195 73.3
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 1.2e-68 263.8 203 71.4
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 1.6e-68 263.5 180 67.8
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 2.1e-68 263.1 238 63.0
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 2.1e-68 263.1 233 66.1
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 2.7e-68 262.7 188 66.5
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 2.7e-68 262.7 203 63.5
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 3.6e-68 262.3 192 66.1
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 6.1e-68 261.5 226 58.8
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 1.0e-67 260.8 233 63.9
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.8e-67 260.0 226 58.4
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 5.2e-67 258.5 187 74.3
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 5.2e-67 258.5 238 58.0
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 3.4e-66 255.8 180 76.1
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 1.7e-65 253.4 236 57.6
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 1.7e-65 253.4 236 59.7
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 1.7e-65 253.4 184 70.1
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 1.7e-65 253.4 236 57.6
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 1.7e-65 253.4 236 59.7
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 4.8e-65 251.9 191 63.4
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 4.8e-65 251.9 182 70.9
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 4.8e-65 251.9 180 73.9
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 8.3e-65 251.1 182 70.3
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.4e-64 250.4 183 64.5
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.4e-64 250.4 183 69.9
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 1.8e-64 250.0 182 69.8
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 1.8e-64 250.0 182 69.8
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 4.1e-64 248.8 183 63.4
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 5.3e-64 248.4 237 60.8
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 9.1e-64 247.7 183 62.8
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 9.1e-64 247.7 183 68.3
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 1.2e-63 247.3 182 69.8
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 4.5e-63 245.4 176 76.7
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 5.9e-63 245.0 194 69.6
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 5.9e-63 245.0 184 72.3
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 7.7e-63 244.6 172 68.6
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 1.3e-62 243.8 184 71.7
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 2.9e-62 242.7 179 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 4.2e-61 238.8 180 72.8
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 1.6e-60 236.9 197 64.5
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 6.1e-60 235.0 232 61.2
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.8e-59 233.4 179 69.8
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 2.3e-59 233.0 176 67.6
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.2e-50 204.1 138 68.1
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 8.6e-46 188.0 131 66.4
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 6.8e-43 178.3 137 56.9
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 8.9e-43 177.9 136 61.8
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 3.4e-42 176.0 180 55.6
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 5.8e-42 175.3 136 60.3
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 5.8e-42 175.3 135 60.7
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 1.3e-41 174.1 132 61.4
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 1.7e-41 173.7 135 60.0
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 1.7e-41 173.7 133 60.9
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.9e-41 172.9 136 58.8
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 4.9e-41 172.2 135 59.3
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 4.9e-41 172.2 135 59.3
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 4.9e-41 172.2 135 59.3
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 6.4e-41 171.8 135 59.3
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 6.4e-41 171.8 135 59.3
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 6.4e-41 171.8 136 58.1
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 7.0e-40 168.3 136 57.4
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 3.5e-39 166.0 136 55.1
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 3.5e-39 166.0 140 53.6
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 8.6e-38 161.4 156 50.0
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 1.2e-36 157.5 236 44.1
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 3.6e-36 156.0 102 73.5
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 3.5e-31 139.4 136 60.3
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 3.9e-30 136.0 105 75.2
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 5.1e-30 135.6 150 47.3
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 1.5e-29 134.0 150 44.7
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 5.6e-29 132.1 106 67.0
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 8.1e-28 128.3 166 43.4
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 1.8e-27 127.1 146 43.8
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.7e-25 120.6 239 42.3
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.2e-23 114.4 125 49.6
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 2.1e-23 113.6 131 55.0
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 5.1e-22 109.0 150 39.3
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 8.6e-22 108.2 237 41.4
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 2.5e-21 106.7 145 37.9
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 4.7e-20 102.4 71 63.4
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 1.8e-19 100.5 175 34.9
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 5.8e-18 95.5 67 68.7
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 4.9e-17 92.4 89 50.6
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 6.4e-17 92.0 108 52.8
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 9.3e-16 88.2 108 43.5
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.3e-13 79.7 64 60.9
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 5.8e-10 68.9 48 66.7
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.4e-08 63.5 79 41.8
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.4e-08 63.5 79 41.8


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