Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 3.6e-111 404.8 192 100.0
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 3.6e-34 149.1 139 48.2
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-34 149.1 143 49.0
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 3.3e-32 142.5 157 43.3
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 9.7e-32 141.0 149 43.6
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-29 133.7 137 40.9
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-29 133.7 137 40.9
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 3.5e-29 132.5 163 41.7
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 5.9e-29 131.7 146 41.1
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.7e-29 131.3 156 41.7
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-28 128.6 138 42.0
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-28 127.9 137 40.1
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-28 127.9 172 36.0
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-27 127.1 138 42.0
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-27 125.9 137 40.1
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-27 125.9 139 42.4
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 9.4e-27 124.4 127 41.7
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 9.4e-27 124.4 139 41.7
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-26 123.6 145 41.4
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-25 120.2 138 41.3
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-25 119.0 133 35.3
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-22 109.4 143 40.6
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-22 108.6 127 38.6
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-22 108.2 139 35.3
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-21 107.5 167 35.3
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 5.9e-21 105.1 142 32.4
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 7.7e-21 104.8 97 44.3
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-20 104.0 143 35.7
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-20 102.4 132 39.4
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 7.2e-19 98.2 151 33.8
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-17 93.2 97 42.3
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-17 92.4 88 43.2
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-17 92.0 137 35.8
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 8.9e-17 91.3 87 43.7
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-16 90.9 127 34.6
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 2.0e-16 90.1 139 37.4
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-16 90.1 168 28.0
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 2.6e-16 89.7 154 35.7
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-16 89.7 114 35.1
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-15 87.4 142 33.8
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-15 86.3 162 30.2
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 5.4e-14 82.0 119 34.5
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-14 81.6 131 34.4
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-13 80.9 135 30.4
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-13 80.5 160 28.8
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.7e-13 79.7 97 37.1
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-13 79.7 93 39.8
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 5.9e-13 78.6 124 31.5
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 5.9e-13 78.6 93 35.5
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 1.1e-11 74.3 99 35.4
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 5.6e-11 72.0 138 29.7
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.5e-11 71.2 132 29.5
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.5e-11 71.2 124 32.3
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.2e-10 70.9 130 31.5
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-10 70.9 128 28.1
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-10 70.5 87 46.0
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 1.6e-10 70.5 93 36.6
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 2.1e-10 70.1 100 35.0
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 2.1e-10 70.1 140 30.7
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-10 70.1 128 28.1
Cc09_g00100 Coffea canephora HOM05D006612 ORTHO05D009014 3.6e-10 69.3 79 43.0
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 4.7e-10 68.9 134 29.9
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 6.1e-10 68.6 118 32.2
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 8.0e-10 68.2 139 25.2
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.0e-09 67.8 131 29.0
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.4e-09 67.4 114 31.6
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-09 67.0 69 37.7
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 2.3e-09 66.6 119 30.3
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 2.3e-09 66.6 128 28.1
Dinv11979 Davidia involucrata HOM05D006612 ORTHO05D009014 5.2e-09 65.5 108 27.8
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 5.2e-09 65.5 128 27.3
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-09 65.5 88 35.2
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.8e-09 65.1 129 27.1
Oeu039609.1 Olea europaea HOM05D008860 ORTHO05D010619 6.8e-09 65.1 119 31.9
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-08 64.3 118 27.1
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-08 63.5 128 26.6
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-08 63.2 137 27.0
Oeu013093.1 Olea europaea HOM05D019936 ORTHO05D010619 2.6e-08 63.2 137 27.7
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 7.5e-08 61.6 153 30.1
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 9.8e-08 61.2 118 26.3
Dinv06490 Davidia involucrata HOM05D000824 ORTHO05D010384 1.3e-07 60.8 86 36.0
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-07 60.1 75 38.7
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 2.2e-07 60.1 127 29.1
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-07 60.1 58 41.4
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 2.9e-07 59.7 91 33.0
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.9e-07 58.9 75 37.3
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 6.4e-07 58.5 127 29.9
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-06 57.0 72 34.7
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 5.4e-06 55.5 127 29.9
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-06 55.1 60 40.0


User provided reference genes

Program Settings