Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.4e-159 566.2 278 100.0
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 1.2e-110 403.7 276 72.1
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 4.4e-110 401.7 277 72.2
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 2.1e-107 392.9 276 71.0
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.3e-106 390.2 276 70.7
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 5.1e-106 388.3 278 70.5
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 5.1e-106 388.3 278 70.1
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.1e-105 387.1 278 70.9
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 3.3e-105 385.6 278 69.4
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 4.7e-104 381.7 276 66.7
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 8.1e-104 380.9 278 70.1
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 3.1e-103 379.0 277 70.4
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.2e-102 377.1 279 67.0
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 4.4e-102 375.2 278 69.1
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.3e-101 373.6 271 70.8
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 2.2e-101 372.9 278 68.7
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 2.9e-101 372.5 266 69.2
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 9.3e-100 367.5 271 68.6
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 2.1e-99 366.3 244 74.6
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 2.7e-99 365.9 276 65.6
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 7.8e-99 364.4 279 66.7
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.3e-98 363.6 278 66.5
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.0e-98 362.5 278 65.8
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.9e-98 362.1 264 69.7
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 8.7e-98 360.9 274 67.9
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.1e-97 360.5 276 67.4
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 3.3e-97 359.0 276 67.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 9.6e-97 357.5 276 67.8
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 6.2e-96 354.8 283 65.4
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 2.4e-95 352.8 270 67.8
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 3.1e-95 352.4 258 69.8
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 6.9e-95 351.3 283 64.3
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 9.0e-95 350.9 284 66.2
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 9.0e-95 350.9 269 66.5
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.2e-94 350.5 284 66.2
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 2.0e-94 349.7 262 68.3
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 3.4e-94 349.0 282 64.5
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 5.8e-94 348.2 217 78.8
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 9.9e-94 347.4 282 64.2
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 2.2e-93 346.3 265 70.2
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.2e-93 346.3 257 67.3
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.9e-93 345.9 276 64.5
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 3.8e-93 345.5 214 79.0
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 4.9e-93 345.1 276 63.8
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 4.9e-93 345.1 250 69.6
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 6.4e-93 344.7 276 64.1
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.4e-93 344.4 277 65.7
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 8.4e-93 344.4 260 67.3
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.4e-92 343.6 210 80.5
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.9e-92 343.2 210 78.6
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.4e-92 342.8 270 66.7
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.2e-92 342.4 283 64.0
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 3.2e-92 342.4 211 78.7
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 5.4e-92 341.7 282 62.8
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 5.4e-92 341.7 286 62.9
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 9.3e-92 340.9 280 66.1
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.6e-91 340.1 277 64.6
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.6e-91 340.1 277 65.3
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 4.6e-91 338.6 278 66.2
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 4.6e-91 338.6 280 61.8
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 6.0e-91 338.2 266 64.3
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 7.9e-91 337.8 277 65.0
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 7.9e-91 337.8 212 76.9
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.3e-90 337.0 272 65.4
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 3.9e-90 335.5 278 64.7
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 2.8e-88 329.3 231 69.3
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.7e-88 328.9 206 77.2
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 3.7e-88 328.9 276 63.0
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 6.2e-88 328.2 285 61.8
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 6.2e-88 328.2 300 59.3
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.1e-87 327.4 247 67.2
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 1.5e-86 323.6 277 61.4
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.6e-86 322.8 281 64.1
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 3.4e-86 322.4 205 76.6
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 7.6e-86 321.2 212 74.1
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 4.9e-85 318.5 183 83.1
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.9e-84 316.6 237 66.2
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 5.5e-84 315.1 236 65.7
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 7.9e-83 311.2 190 78.9
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.0e-82 310.8 272 59.6
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.3e-82 310.5 250 62.8
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.3e-82 310.5 223 65.9
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 8.7e-82 307.8 244 64.3
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.5e-81 307.0 285 56.8
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.5e-81 307.0 285 56.8
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.5e-81 307.0 285 56.8
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.9e-81 306.6 250 62.0
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 7.4e-81 304.7 187 78.1
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 9.6e-81 304.3 219 68.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 2.1e-80 303.1 250 61.6
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 6.2e-80 301.6 191 75.9
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 9.0e-79 297.7 212 66.5
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 2.9e-77 292.7 240 60.8
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 4.9e-77 292.0 189 76.2
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.4e-76 290.4 185 73.0
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.6e-75 287.0 213 68.5
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 3.9e-74 282.3 260 58.5
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 5.1e-74 282.0 245 60.8
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.8e-69 265.8 164 75.0
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.4e-63 247.3 187 60.4
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 3.1e-63 246.1 216 55.6
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.3e-50 203.4 119 83.2
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.0e-49 200.3 193 52.8
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.7e-48 197.2 102 90.2
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 4.8e-48 195.7 180 54.4
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.4e-33 146.4 93 74.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 9.5e-28 128.3 81 75.3
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.8e-27 126.7 135 52.6
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.3e-24 117.9 86 62.8
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.1e-23 112.8 78 69.2
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 6.4e-16 89.0 152 34.9
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.3e-13 80.5 87 49.4
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 8.9e-10 68.6 173 32.4
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 6.4e-08 62.4 33 90.9
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 6.0e-06 55.8 31 80.6


User provided reference genes

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