Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 5.2e-41 170.6 87 100.0
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 6.0e-13 77.4 89 60.7
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 1.7e-12 75.9 89 57.3
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 8.7e-12 73.6 87 57.5
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 1.5e-11 72.8 94 51.1
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.5e-11 72.0 89 57.3
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 5.6e-11 70.9 92 55.4
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 5.6e-11 70.9 87 52.9
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 9.6e-11 70.1 92 55.4
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 9.6e-11 70.1 87 52.9
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 1.3e-10 69.7 89 56.2
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.8e-10 68.6 89 53.9
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 6.2e-10 67.4 80 50.0
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 2.4e-09 65.5 89 56.2
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 2.4e-09 65.5 84 52.4
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 4.0e-09 64.7 89 53.9
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 5.3e-09 64.3 84 50.0
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 6.9e-09 63.9 82 54.9
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 9.0e-09 63.5 89 49.4
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 9.0e-09 63.5 94 48.9
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 1.2e-08 63.2 90 52.2
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 1.2e-08 63.2 89 55.1
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.2e-08 63.2 93 50.5
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 2.0e-08 62.4 87 51.7
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 2.6e-08 62.0 88 52.3
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 2.6e-08 62.0 87 48.3
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 4.4e-08 61.2 87 49.4
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 4.4e-08 61.2 88 50.0
CAN.G567.106 Capsicum annuum HOM05D008304 ORTHO05D004056 5.8e-08 60.8 78 51.3
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 5.8e-08 60.8 87 49.4
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 5.8e-08 60.8 87 49.4
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 5.8e-08 60.8 87 49.4
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 9.9e-08 60.1 87 54.0
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 9.9e-08 60.1 87 49.4
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 1.3e-07 59.7 88 51.1
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 2.2e-07 58.9 87 50.6
ECA233G3589 Erigeron canadensis HOM05D000020 ORTHO05D000543 2.9e-07 58.5 85 48.2
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 2.9e-07 58.5 83 49.4
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 2.9e-07 58.5 96 49.0
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 4.9e-07 57.8 80 46.2
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 8.4e-07 57.0 87 47.1
Potri.011G151900 Populus trichocarpa HOM05D008304 ORTHO05D004056 1.1e-06 56.6 87 48.3
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 2.4e-06 55.5 80 50.0
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 2.4e-06 55.5 87 50.6
CsaV3_5G001550 Cucumis sativus L. HOM05D008304 ORTHO05D004056 3.2e-06 55.1 88 48.9
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 3.2e-06 55.1 88 48.9
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.2e-06 55.1 88 48.9
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.2e-06 55.1 88 48.9
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.2e-06 55.1 88 48.9
HanXRQChr07g0192251 Helianthus annuus HOM05D010428 ORTHO05D012179 3.2e-06 55.1 87 48.3
ATR0776G010 Amborella trichopoda HOM05D045262 ORTHO05D004056 5.4e-06 54.3 93 41.9
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 7.1e-06 53.9 87 46.0
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 7.1e-06 53.9 87 46.0


User provided reference genes

Program Settings