Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 2.5e-254 882.1 613 100.0
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 5.0e-122 442.6 600 59.8
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 4.2e-121 439.5 635 60.2
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 4.0e-119 433.0 603 61.9
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 2.6e-118 430.3 599 58.6
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 5.7e-118 429.1 607 54.4
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 7.2e-113 412.1 593 58.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 4.7e-112 409.5 595 57.5
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 8.0e-112 408.7 599 59.3
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.4e-111 407.9 628 55.9
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 2.3e-111 407.1 597 56.1
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.0e-111 406.8 597 62.1
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 8.8e-111 405.2 599 57.1
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 7.5e-110 402.1 596 59.4
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 9.8e-110 401.7 541 60.6
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 2.2e-109 400.6 624 56.4
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 6.3e-109 399.1 597 57.8
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.4e-108 397.9 595 60.7
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 7.0e-108 395.6 596 62.2
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.2e-107 394.8 597 53.1
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 8.6e-106 388.7 596 61.7
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 9.5e-105 385.2 601 57.1
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 9.5e-105 385.2 621 44.8
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.6e-104 384.4 636 54.9
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 4.7e-104 382.9 599 55.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 6.8e-103 379.0 596 54.9
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 2.0e-102 377.5 596 60.4
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 3.4e-102 376.7 598 55.4
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.7e-101 373.2 627 45.6
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.4e-101 372.5 612 43.0
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 8.3e-101 372.1 623 49.9
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-100 370.9 617 38.4
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.0e-99 367.5 599 52.9
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.0e-98 365.2 582 56.9
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.0e-98 365.2 599 56.4
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.3e-98 364.8 625 46.1
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.7e-98 364.4 600 56.3
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.5e-97 361.3 601 44.1
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.5e-97 360.5 617 44.9
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 2.5e-97 360.5 559 56.7
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.6e-96 357.8 592 44.9
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.6e-96 356.7 599 52.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.8e-95 354.4 601 49.1
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.5e-94 351.3 598 58.5
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.6e-94 350.5 617 55.4
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 2.4e-92 344.0 596 46.8
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 9.2e-92 342.0 599 52.3
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 2.0e-91 340.9 622 50.5
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 2.0e-91 340.9 598 54.5
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 4.6e-91 339.7 604 55.8
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 6.0e-91 339.3 600 53.7
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 3.0e-90 337.0 597 56.4
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 3.9e-90 336.7 598 48.2
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 8.6e-90 335.5 598 53.8
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 2.8e-88 330.5 598 44.6
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 6.8e-87 325.9 609 48.3
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.6e-86 323.9 618 56.1
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 8.3e-85 318.9 555 54.2
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.4e-84 318.2 613 50.2
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 7.8e-83 312.4 602 50.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 2.3e-82 310.8 627 45.1
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 3.3e-81 307.0 598 50.8
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.3e-81 306.6 517 58.6
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 2.1e-80 304.3 601 53.7
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 3.6e-80 303.5 520 53.5
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 8.1e-80 302.4 598 52.2
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 8.1e-80 302.4 518 58.1
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.5e-78 298.1 595 53.3
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 5.8e-78 296.2 598 52.3
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 7.6e-78 295.8 385 55.6
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 2.9e-77 293.9 601 52.9
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 6.4e-77 292.7 598 51.0
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 1.1e-76 292.0 368 55.2
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.1e-76 292.0 551 48.8
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 4.1e-76 290.0 607 48.3
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 4.1e-76 290.0 607 48.3
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 4.1e-76 290.0 541 48.1
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 9.2e-76 288.9 595 52.3
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.3e-73 280.0 604 48.0
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.3e-73 280.0 604 48.0
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 6.2e-72 276.2 624 44.6
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 5.2e-71 273.1 604 47.7
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.1e-68 265.4 389 50.6
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.6e-67 261.5 565 56.5
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.0e-66 258.8 593 46.2
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.8e-63 248.1 596 51.7
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 2.9e-61 240.7 601 49.8
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 3.2e-60 237.3 595 48.1
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 9.3e-60 235.7 596 49.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.6e-59 235.0 382 49.5
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 4.3e-57 226.9 369 58.8
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 5.3e-55 219.9 603 43.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 8.4e-53 212.6 614 34.4
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 8.4e-53 212.6 614 34.4
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 7.1e-52 209.5 595 46.4
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 9.3e-52 209.1 595 46.6
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 9.3e-52 209.1 593 41.8
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 3.0e-50 204.1 520 45.8
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 5.6e-49 199.9 519 44.1
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.6e-48 198.4 609 45.3
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 2.0e-46 191.4 601 25.8
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 7.9e-43 179.5 544 45.8
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.1e-40 171.4 613 45.4
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.6e-27 127.5 343 30.3
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 6.7e-26 123.2 158 43.7
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.6e-25 121.3 151 51.7
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 3.2e-20 104.4 228 33.8
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 4.2e-20 104.0 229 42.8
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.0e-10 72.8 207 52.7
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.4e-10 72.4 75 56.0
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 1.4e-10 72.4 75 56.0
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 7.5e-09 66.6 66 56.1
Medtr0050s0150 Medicago truncatula HOM05D006572 ORTHO05D008181 1.3e-08 65.9 115 42.6
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.1e-07 62.8 89 39.3


User provided reference genes

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