Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g15940 Coffea canephora HOM05D013409 ORTHO05D013278 1.6e-125 453.0 261 100.0
Actinidia22147 Actinidia chinensis HOM05D010372 ORTHO05D010753 2.3e-20 103.6 239 37.2
Dinv38842 Davidia involucrata HOM05D010372 ORTHO05D010753 1.4e-17 94.4 240 35.4
Oeu061103.1 Olea europaea HOM05D020898 ORTHO05D013278 6.6e-15 85.5 258 34.9
Nitab4.5_0002944g0140 Nicotiana tabacum HOM05D013409 ORTHO05D013278 8.1e-13 78.6 163 34.4
CAN.G532.109 Capsicum annuum HOM05D013409 ORTHO05D013278 1.1e-12 78.2 194 32.0
SalBow1G6371 Salvia bowleyana HOM05D020898 ORTHO05D013278 8.9e-12 75.1 246 35.4
SalBow1G7699 Salvia bowleyana HOM05D020898 ORTHO05D013278 1.5e-11 74.3 242 34.7
CiPaw.11G122600 Carya illinoinensis HOM05D010372 ORTHO05D010753 1.3e-10 71.2 186 34.4
Manes.02G011000 Manihot esculenta HOM05D010372 ORTHO05D010753 8.4e-10 68.6 187 34.2
Potri.003G139000 Populus trichocarpa HOM05D010372 ORTHO05D010753 3.2e-09 66.6 181 35.4
Nitab4.5_0010144g0050 Nicotiana tabacum HOM05D013409 ORTHO05D013278 5.4e-09 65.9 159 31.4
TAR636G2812 Trochodendron aralioides HOM05D017143 ORTHO05D010753 5.4e-09 65.9 273 28.2
Manes.01G049631 Manihot esculenta HOM05D010372 ORTHO05D010753 1.6e-08 64.3 290 31.0
Solyc08g008290.3 Solanum lycopersicum HOM05D013409 ORTHO05D013278 3.5e-08 63.2 208 31.2
Gorai.004G134100 Gossypium raimondii HOM05D012734 ORTHO05D010753 6.0e-08 62.4 171 35.1
Nitab4.5_0007367g0060 Nicotiana tabacum HOM05D013409 ORTHO05D013278 1.0e-07 61.6 164 31.1
PGSC0003DMG400005789 Solanum tuberosum HOM05D013409 ORTHO05D013278 1.0e-07 61.6 208 30.3
FAN18G3321 Fragaria x ananassa HOM05D010372 ORTHO05D010753 1.3e-07 61.2 241 29.5
Cfa012797 Carpinus fangiana HOM05D029168 ORTHO05D010753 3.0e-07 60.1 253 30.8
COL.COLO4_10683 Corchorus olitorius HOM05D012734 ORTHO05D010753 3.9e-07 59.7 182 31.3
Haze_08625 Corylus avellana HOM05D029168 ORTHO05D010753 5.1e-07 59.3 152 33.6
Sopen08g004150 Solanum pennellii HOM05D013409 ORTHO05D013278 5.1e-07 59.3 208 30.8
Cfa023587 Carpinus fangiana HOM05D029168 ORTHO05D010753 6.6e-07 58.9 253 30.4
Haze_08627 Corylus avellana HOM05D029168 ORTHO05D010753 8.6e-07 58.5 155 34.2
FAN18G3168 Fragaria x ananassa HOM05D010372 ORTHO05D010753 8.6e-07 58.5 250 26.8
Gohir.A08G097300 Gossypium hirsutum HOM05D012734 ORTHO05D010753 8.6e-07 58.5 171 33.3
Duzib068G0715 Durio zibethinus HOM05D012734 ORTHO05D010753 1.5e-06 57.8 153 32.7
Thecc.03G296200 Theobroma cacao HOM05D012734 ORTHO05D010753 1.5e-06 57.8 174 32.2
FvH4_5g04430 Fragaria vesca HOM05D010372 ORTHO05D010753 1.9e-06 57.4 250 28.0
Gohir.A12G235800 Gossypium hirsutum HOM05D012734 ORTHO05D010753 1.9e-06 57.4 167 30.5
Gohir.D08G131200 Gossypium hirsutum HOM05D012734 ORTHO05D010753 1.9e-06 57.4 171 34.5
Nitab4.5_0000223g0290 Nicotiana tabacum HOM05D013409 ORTHO05D013278 4.3e-06 56.2 159 28.3
Peaxi162Scf00102g01722 Petunia axillaris HOM05D013409 ORTHO05D013278 4.3e-06 56.2 203 28.1
Actinidia22146 Actinidia chinensis HOM05D000212 ORTHO05D000225 5.6e-06 55.8 166 32.5
FAN13G1611 Fragaria x ananassa HOM05D010372 ORTHO05D010753 9.6e-06 55.1 245 25.7


User provided reference genes

Program Settings