Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 4.1e-47 191.0 96 100.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.1e-39 166.4 96 87.5
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.2e-39 164.9 96 86.5
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 9.2e-39 163.3 96 83.3
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 3.5e-38 161.4 97 83.5
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 7.8e-38 160.2 95 83.2
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.3e-37 159.5 96 83.3
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 1.7e-37 159.1 96 84.4
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 5.0e-37 157.5 96 82.3
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 6.6e-37 157.1 96 81.2
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.9e-36 155.6 96 81.2
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 2.5e-36 155.2 94 81.9
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 3.3e-36 154.8 96 79.2
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.3e-36 153.7 94 80.9
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.5e-36 153.3 96 81.2
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.2e-35 152.9 92 83.7
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.2e-35 152.9 92 83.7
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 77.1
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 2.8e-35 151.8 96 79.2
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 4.7e-35 151.0 96 77.1
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 4.7e-35 151.0 96 79.2
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 6.1e-35 150.6 96 78.1
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 6.1e-35 150.6 96 78.1
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 6.1e-35 150.6 96 76.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 8.0e-35 150.2 94 79.8
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 8.0e-35 150.2 96 78.1
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.4e-34 149.4 97 79.4
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.8e-34 149.1 90 83.3
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.8e-34 149.1 95 76.8
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.8e-34 149.1 96 78.1
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 3.1e-34 148.3 90 82.2
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 3.1e-34 148.3 96 78.1
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 4.0e-34 147.9 96 75.0
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 77.7
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 79.8
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 5.2e-34 147.5 96 75.0
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 76.0
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 76.0
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 78.1
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.5e-33 146.0 96 76.0
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.5e-33 146.0 96 75.0
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.5e-33 146.0 96 75.0
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.5e-33 146.0 96 76.0
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.5e-33 146.0 96 76.0
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 2.0e-33 145.6 96 76.0
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.4e-33 144.8 84 86.9
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 3.4e-33 144.8 96 76.0
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 5.8e-33 144.1 94 75.5
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 7.5e-33 143.7 96 74.0
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 77.1
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.3e-32 142.9 96 71.9
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.3e-32 142.9 97 75.3
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 2.2e-32 142.1 94 71.3
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.2e-32 142.1 92 75.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.2e-32 142.1 93 74.2
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 2.9e-32 141.7 93 73.1
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 3.7e-32 141.4 92 76.1
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 4.9e-32 141.0 93 73.1
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 6.4e-32 140.6 92 75.0
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 8.3e-32 140.2 94 70.2
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 8.3e-32 140.2 96 71.9
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 8.3e-32 140.2 96 71.9
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.9e-31 139.0 92 73.9
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.4e-31 138.7 88 77.3
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.4e-31 138.7 88 77.3
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 7.0e-31 137.1 94 72.3
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.2e-30 136.3 93 69.9
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 2.0e-30 135.6 93 73.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 7.8e-30 133.7 97 69.1
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 7.8e-30 133.7 97 69.1
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 7.8e-30 133.7 97 69.1
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.0e-29 133.3 96 68.8
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.3e-29 132.1 93 69.9
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.9e-28 129.0 92 69.6
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 3.3e-28 128.3 96 67.7
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.2e-27 126.3 97 64.9
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 8.0e-27 123.6 87 72.4
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.1e-26 123.2 69 89.9
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.3e-26 122.1 75 78.7
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 2.3e-26 122.1 97 66.0
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-25 119.8 125 53.6
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.5e-25 119.4 87 63.2
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.4e-25 117.9 83 68.7
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 5.8e-25 117.5 94 59.6
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 5.8e-25 117.5 94 59.6
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 5.8e-25 117.5 94 59.6
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 5.8e-25 117.5 94 59.6
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 7.5e-25 117.1 75 72.0
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 9.8e-25 116.7 82 67.1
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 1.3e-24 116.3 84 69.0
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 3.7e-24 114.8 94 58.5
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 4.9e-24 114.4 94 58.5
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 4.9e-24 114.4 87 64.4
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 6.4e-24 114.0 87 64.4
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 6.4e-24 114.0 89 64.0
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 8.3e-24 113.6 72 81.9
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 3.2e-23 111.7 99 59.6
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.2e-23 111.7 68 77.9
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 2.3e-21 105.5 92 60.9
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 3.0e-21 105.1 84 61.9
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 3.0e-21 105.1 82 70.7
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 6.8e-18 94.0 94 48.9
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.9e-16 87.8 97 51.5
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 2.7e-14 82.0 68 58.8
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.3e-13 79.7 51 74.5
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 6.0e-06 54.3 63 52.4


User provided reference genes

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