Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 2.2e-137 492.3 250 100.0
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 3.0e-89 332.4 205 78.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 8.6e-89 330.9 250 67.2
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.9e-88 329.7 233 68.7
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.2e-87 327.0 246 69.5
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.6e-87 325.5 246 69.1
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 1.1e-86 323.9 248 67.3
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.8e-86 323.2 241 66.8
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 4.0e-86 322.0 217 71.9
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.2e-85 320.5 204 74.5
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.0e-85 319.7 282 61.3
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.0e-85 319.7 201 76.6
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 2.6e-85 319.3 216 71.8
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.6e-85 319.3 223 68.2
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 4.4e-85 318.5 203 73.4
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 9.9e-85 317.4 202 75.2
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.3e-84 317.0 200 74.5
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.3e-84 317.0 226 66.8
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.3e-84 317.0 223 67.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.7e-84 316.6 222 69.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 2.2e-84 316.2 245 63.7
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 2.9e-84 315.8 207 72.5
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 4.9e-84 315.1 205 71.7
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 4.9e-84 315.1 206 72.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 6.4e-84 314.7 204 73.5
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 8.4e-84 314.3 227 66.5
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 1.1e-83 313.9 198 75.3
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 7.1e-83 311.2 207 70.5
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 9.3e-83 310.8 240 62.9
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.2e-82 310.5 216 66.7
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.6e-82 310.1 212 70.8
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.1e-82 309.7 190 77.4
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.7e-82 309.3 208 69.2
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.5e-82 308.9 204 74.0
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 3.5e-82 308.9 250 61.6
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 6.0e-82 308.1 223 67.7
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 6.0e-82 308.1 246 63.0
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 7.8e-82 307.8 246 63.8
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 7.8e-82 307.8 218 67.4
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.0e-81 307.4 244 63.1
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.0e-81 307.4 216 66.7
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 2.3e-81 306.2 203 69.0
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 3.0e-81 305.8 214 67.3
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 3.0e-81 305.8 229 64.6
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.0e-81 305.8 246 63.4
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 3.9e-81 305.4 208 73.1
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 3.3e-80 302.4 201 71.1
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 5.6e-80 301.6 200 69.5
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 6.2e-79 298.1 203 68.0
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 6.2e-79 298.1 222 65.3
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 8.1e-79 297.7 204 66.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.4e-78 297.0 203 67.5
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.8e-78 296.6 187 75.9
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 3.1e-78 295.8 226 65.0
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 3.1e-78 295.8 243 60.9
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 3.1e-78 295.8 198 70.2
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 5.3e-78 295.0 203 67.0
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 9.0e-78 294.3 240 61.7
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 1.5e-77 293.5 203 66.5
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.5e-77 293.5 202 67.3
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.5e-77 293.5 202 67.3
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.5e-77 293.5 206 68.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.6e-77 292.7 263 56.7
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 5.8e-77 291.6 218 64.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.7e-76 290.0 202 65.8
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.9e-76 289.3 202 66.8
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 2.9e-76 289.3 211 64.0
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 8.4e-76 287.7 205 66.8
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.1e-75 287.3 229 59.8
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.4e-75 287.0 238 61.3
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.4e-75 287.0 203 66.5
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.9e-75 286.6 243 60.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.9e-75 286.6 218 63.8
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 4.2e-75 285.4 246 61.8
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 5.4e-75 285.0 242 58.7
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 9.3e-75 284.3 221 62.0
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.6e-74 283.5 202 66.3
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 4.6e-74 282.0 323 51.7
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 6.0e-74 281.6 201 67.2
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.3e-73 280.4 223 60.5
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.3e-73 279.6 204 65.7
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.1e-72 277.3 248 58.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.9e-72 276.6 237 55.7
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.6e-71 273.5 222 57.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 6.2e-71 271.6 198 65.7
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 8.1e-71 271.2 200 63.5
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.8e-70 270.0 181 72.9
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.2e-69 267.3 199 62.3
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 2.6e-69 266.2 200 63.5
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 9.9e-69 264.2 246 56.9
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.2e-66 257.3 244 56.1
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.0e-65 254.2 176 70.5
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.8e-65 253.4 213 59.2
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 3.0e-65 252.7 204 58.3
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.3e-64 249.2 176 68.8
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 4.0e-62 242.3 180 63.9
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.2e-61 240.7 243 54.3
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.3e-60 237.3 161 71.4
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-56 224.2 142 73.2
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 2.5e-56 223.0 207 51.2
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 5.9e-53 211.8 154 66.2
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.9e-46 188.3 182 56.6
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 9.1e-46 188.0 182 53.3
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.2e-45 187.6 130 66.2
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.6e-42 175.6 110 74.5
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.0e-41 172.9 112 75.9
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 3.3e-40 169.5 136 61.0
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.2e-37 161.0 113 69.0
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 6.5e-36 155.2 131 59.5
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.7e-34 149.8 88 77.3
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.1e-30 137.9 94 73.4
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 8.0e-26 121.7 91 64.8
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 2.3e-25 120.2 89 67.4
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 5.2e-25 119.0 134 50.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-24 117.9 84 64.3
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 2.6e-24 116.7 121 53.7
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 4.4e-24 115.9 85 65.9
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.7e-23 114.0 79 68.4
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 7.0e-22 108.6 70 67.1
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.0e-21 107.1 155 41.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.8e-17 92.0 65 64.6
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 5.7e-16 89.0 71 60.6
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.3e-15 87.8 67 58.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 4.7e-10 69.3 52 65.4
MCO16G507 Micromonas commoda HOM05D066398 ORTHO05D044075 9.2e-06 55.1 234 23.9


User provided reference genes

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