Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.5e-206 722.6 364 100.0
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 2.4e-148 529.3 356 71.9
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 3.1e-148 528.9 359 73.8
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 5.4e-148 528.1 361 72.9
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 5.9e-147 524.6 356 74.4
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.0e-146 523.9 361 71.2
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 1.3e-146 523.5 358 72.6
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.7e-146 523.1 356 74.2
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.7e-146 523.1 356 74.2
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 2.3e-146 522.7 356 73.0
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 8.6e-146 520.8 347 76.1
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.5e-145 520.0 358 73.7
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 9.5e-145 517.3 396 67.2
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 9.5e-145 517.3 355 71.8
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.0e-143 513.8 351 73.2
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.8e-143 513.1 353 72.2
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 6.8e-143 511.1 361 70.1
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 1.2e-142 510.4 354 71.5
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.6e-142 509.2 351 72.6
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 2.6e-142 509.2 350 71.7
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 3.4e-142 508.8 359 70.2
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 4.4e-142 508.4 359 70.5
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 5.8e-142 508.1 355 69.9
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 7.5e-142 507.7 354 70.3
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 9.8e-142 507.3 359 69.9
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 1.1e-140 503.8 352 71.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.4e-140 503.4 352 71.9
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.9e-140 503.1 356 70.5
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 2.4e-140 502.7 356 69.7
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 7.0e-140 501.1 358 70.9
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.2e-139 500.4 356 69.9
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 2.0e-139 499.6 352 71.6
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.5e-139 498.8 356 68.8
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 6.0e-139 498.0 360 70.3
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 6.0e-139 498.0 360 70.3
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 6.0e-139 498.0 360 70.3
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 7.8e-139 497.7 356 70.2
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 1.0e-138 497.3 356 69.7
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 1.0e-138 497.3 358 70.4
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 5.0e-138 495.0 355 70.1
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 6.6e-138 494.6 356 69.1
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 8.6e-138 494.2 357 68.6
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.1e-137 493.8 356 69.1
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.5e-137 493.4 355 69.0
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.9e-137 493.0 352 70.7
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 3.3e-137 492.3 359 68.5
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 9.5e-137 490.7 356 68.5
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.2e-136 490.3 357 69.2
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.2e-136 490.3 356 66.3
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 4.7e-136 488.4 351 70.1
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 4.7e-136 488.4 358 69.8
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 6.2e-136 488.0 355 68.7
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 2.3e-135 486.1 351 68.9
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 3.1e-135 485.7 355 68.7
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 5.2e-135 485.0 351 67.2
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 8.9e-135 484.2 351 70.1
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.2e-133 479.6 351 67.5
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 8.3e-133 477.6 355 67.6
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 4.1e-132 475.3 355 68.7
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 9.2e-132 474.2 359 67.7
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 1.6e-131 473.4 363 66.1
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.7e-131 472.6 352 66.2
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.5e-131 472.2 395 63.0
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.6e-131 471.9 352 67.9
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 6.0e-131 471.5 413 60.3
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 7.8e-131 471.1 319 72.1
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.3e-130 469.5 319 74.9
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 3.0e-130 469.2 353 65.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 3.9e-130 468.8 324 71.3
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 1.5e-129 466.8 319 74.9
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 5.4e-124 448.4 343 64.7
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 7.3e-121 438.0 352 63.6
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 3.6e-120 435.6 352 59.9
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.8e-119 433.3 315 68.3
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.8e-119 433.3 357 62.2
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.2e-118 430.6 323 66.6
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 3.4e-118 429.1 355 58.9
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 9.2e-116 421.0 286 74.8
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.3e-114 417.2 358 61.2
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.3e-112 410.6 355 59.7
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 2.2e-101 373.2 355 56.3
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 5.6e-97 358.6 349 53.0
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.4e-94 349.4 347 54.8
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 6.4e-93 345.1 247 70.0
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 1.4e-92 344.0 227 74.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.4e-92 344.0 329 50.8
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 6.0e-91 338.6 332 52.4
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.1e-87 327.8 333 51.1
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 2.5e-73 280.0 214 68.2
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.8e-71 273.9 301 52.5
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 6.1e-67 258.8 183 68.9
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 9.1e-63 245.0 464 33.8
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 5.5e-60 235.7 175 65.1
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.8e-42 177.6 169 53.3
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-39 167.2 132 62.9
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-39 167.2 132 62.9
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.2e-33 148.3 259 36.7
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 5.4e-31 139.4 199 41.2
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.5e-20 104.0 88 56.8
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 4.4e-17 93.2 88 45.5
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 9.8e-17 92.0 89 43.8
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 2.2e-16 90.9 76 60.5
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 7.3e-12 75.9 54 75.9


User provided reference genes

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