Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 3.0e-128 461.8 234 100.0
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 5.6e-98 361.3 236 77.5
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 5.6e-98 361.3 234 77.4
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 9.5e-98 360.5 230 79.1
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.1e-97 359.4 236 77.1
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 8.1e-97 357.5 236 76.7
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.8e-96 356.3 233 76.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 5.2e-96 354.8 233 78.5
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.2e-95 353.6 236 76.7
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.5e-95 353.2 233 78.1
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.7e-94 349.7 243 73.3
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.2e-94 349.4 233 77.7
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.9e-94 349.0 232 75.9
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 4.9e-94 348.2 241 73.4
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.1e-93 347.1 236 74.6
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 1.4e-93 346.7 233 76.4
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.1e-93 345.1 231 73.6
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.1e-93 345.1 232 75.0
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 4.1e-93 345.1 232 75.4
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 7.1e-93 344.4 231 74.9
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 7.1e-93 344.4 233 75.1
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.5e-92 342.0 231 74.0
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.0e-91 340.5 232 75.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.0e-91 340.5 233 73.0
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.3e-91 340.1 229 74.2
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.3e-91 339.3 231 73.6
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 5.1e-91 338.2 233 74.7
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 6.6e-91 337.8 233 75.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 8.6e-91 337.4 233 73.0
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.1e-90 337.0 233 73.4
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.1e-90 337.0 232 73.3
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.1e-90 337.0 231 73.6
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.1e-90 337.0 234 72.2
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.5e-90 336.7 234 71.4
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.5e-90 336.7 233 72.5
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.9e-90 336.3 231 72.7
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 9.6e-90 334.0 233 73.4
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 9.6e-90 334.0 238 74.8
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 2.8e-89 332.4 231 74.0
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.8e-89 332.4 236 71.2
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.6e-89 332.0 229 72.1
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 4.7e-89 331.6 229 74.2
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 6.2e-89 331.3 233 72.1
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 8.1e-89 330.9 234 71.8
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.1e-88 330.5 236 70.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.8e-88 329.7 227 75.3
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 2.4e-88 329.3 230 72.6
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 2.4e-88 329.3 230 69.1
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 4.0e-88 328.6 231 71.9
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 6.9e-88 327.8 234 71.4
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.9e-88 327.4 231 70.6
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.5e-87 326.6 230 68.3
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 5.8e-87 324.7 234 70.1
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.3e-86 323.6 236 69.5
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.3e-86 323.6 299 59.5
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 1.7e-86 323.2 230 70.4
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 2.2e-86 322.8 233 69.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 6.4e-86 321.2 230 70.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 2.4e-85 319.3 178 84.8
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 4.2e-85 318.5 230 70.0
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 7.1e-85 317.8 225 71.6
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 9.3e-85 317.4 296 59.8
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.6e-84 316.6 277 62.1
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.7e-84 315.8 239 66.9
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 3.5e-84 315.5 230 68.7
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 3.5e-84 315.5 227 68.7
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 4.6e-84 315.1 233 69.1
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 6.0e-84 314.7 229 70.3
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 6.0e-84 314.7 229 70.3
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 7.8e-84 314.3 229 69.4
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 7.8e-84 314.3 229 69.4
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 7.8e-84 314.3 242 67.8
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.7e-83 313.2 229 70.3
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.3e-83 312.8 257 63.4
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.9e-82 309.7 239 66.1
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 5.6e-82 308.1 269 60.2
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.6e-81 306.6 232 67.2
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.6e-81 305.4 234 67.5
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.1e-80 303.9 231 67.1
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.1e-80 302.4 228 68.4
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 4.0e-80 302.0 232 66.4
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.3e-78 297.0 231 66.2
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.3e-78 297.0 181 77.9
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.3e-78 297.0 229 67.2
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.7e-78 296.6 217 68.7
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 5.6e-74 281.6 234 64.5
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 5.6e-74 281.6 233 64.8
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 5.3e-72 275.0 229 62.0
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 6.9e-72 274.6 203 70.4
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.3e-70 270.4 229 60.7
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.1e-69 267.3 251 57.8
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 9.3e-69 264.2 242 57.4
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.2e-68 263.8 163 76.1
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.6e-68 263.5 186 73.7
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 3.9e-67 258.8 234 57.7
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.3e-66 255.8 180 66.1
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.8e-65 251.9 193 68.4
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.1e-64 250.8 179 66.5
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 8.4e-62 241.1 385 41.8
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 7.4e-58 228.0 232 53.0
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 2.6e-55 219.5 180 59.4
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 4.2e-53 212.2 160 70.6
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 7.4e-50 201.4 182 62.6
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.2e-47 194.1 155 67.7
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 3.2e-45 186.0 185 50.3
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 3.8e-38 162.5 133 63.9
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 3.8e-38 162.5 133 63.9
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 2.5e-37 159.8 223 39.9
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 7.2e-37 158.3 164 56.1
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 8.8e-35 151.4 138 62.3
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 7.0e-32 141.7 165 43.6
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.6e-28 130.6 142 50.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 4.0e-27 125.9 142 49.3
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.3e-22 110.9 107 63.6
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 5.0e-22 109.0 80 67.5
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.5e-21 106.7 187 39.0
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 4.2e-21 105.9 101 55.4
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 4.2e-21 105.9 103 58.3
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 7.2e-21 105.1 54 85.2
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.7e-14 84.0 101 48.5
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 6.1e-12 75.5 48 72.9
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.0e-11 73.2 84 47.6


User provided reference genes

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