Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 1.3e-105 386.3 190 100.0
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 3.3e-64 248.8 141 79.4
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 3.3e-64 248.8 141 79.4
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 3.6e-63 245.4 140 79.3
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.4e-62 243.4 147 75.5
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 2.0e-61 239.6 137 79.6
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 2.0e-61 239.6 137 79.6
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 2.6e-61 239.2 139 77.0
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 3.4e-61 238.8 139 77.0
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.3e-60 236.9 139 78.4
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.3e-60 236.9 142 81.0
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 2.2e-60 236.1 146 74.7
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 3.8e-60 235.3 151 72.8
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 8.4e-60 234.2 144 73.6
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.1e-59 233.8 136 78.7
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.1e-59 233.8 139 75.5
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 4.2e-59 231.9 149 73.8
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.6e-58 229.9 154 70.1
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.6e-58 229.9 144 74.3
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.7e-58 229.2 145 74.5
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 2.7e-58 229.2 142 72.5
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 7.8e-58 227.6 151 72.2
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.0e-57 227.3 141 75.9
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 1.3e-57 226.9 156 70.5
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 5.1e-57 224.9 143 74.8
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.1e-57 224.9 150 67.3
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.5e-56 223.4 170 65.3
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 3.3e-56 222.2 146 69.9
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.3e-56 222.2 139 73.4
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 4.3e-56 221.9 137 73.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 7.3e-56 221.1 148 71.6
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 7.3e-56 221.1 139 72.7
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 9.6e-56 220.7 148 68.2
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.3e-55 220.3 137 74.5
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.8e-55 219.2 137 74.5
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 3.6e-55 218.8 142 73.2
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 4.8e-55 218.4 138 73.2
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 4.8e-55 218.4 143 69.9
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 8.1e-55 217.6 138 74.6
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 8.1e-55 217.6 140 71.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.1e-54 217.2 119 81.5
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 1.1e-54 217.2 145 70.3
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.4e-54 216.9 139 72.7
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.8e-54 216.5 145 68.3
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 2.4e-54 216.1 140 69.3
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 2.4e-54 216.1 142 71.8
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 4.0e-54 215.3 137 72.3
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 4.0e-54 215.3 140 68.6
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 4.0e-54 215.3 146 68.5
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 6.9e-54 214.5 138 75.4
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 9.0e-54 214.2 145 71.0
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.0e-53 213.0 119 79.8
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 2.0e-53 213.0 145 67.6
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.0e-53 213.0 145 67.6
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 2.6e-53 212.6 139 74.1
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 4.4e-53 211.8 120 80.8
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 5.8e-53 211.5 140 73.6
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.3e-52 210.3 140 67.9
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.2e-52 209.5 145 66.9
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 3.8e-52 208.8 183 57.4
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 3.8e-52 208.8 140 71.4
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 2.4e-51 206.1 137 70.1
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 3.2e-51 205.7 145 71.0
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 1.6e-50 203.4 175 59.4
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 6.6e-49 198.0 151 64.9
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 8.7e-49 197.6 120 75.8
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.1e-48 197.2 136 66.2
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.1e-46 190.7 168 58.9
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.4e-46 190.3 136 69.9
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 4.0e-46 188.7 117 73.5
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.6e-45 186.0 136 61.8
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 3.4e-45 185.7 124 71.8
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 4.9e-44 181.8 117 69.2
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 3.2e-43 179.1 111 75.7
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 4.2e-43 178.7 254 40.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 3.5e-42 175.6 104 76.9
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.3e-41 172.9 153 59.5
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 8.7e-41 171.0 120 70.8
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.1e-40 170.6 116 65.5
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 2.5e-40 169.5 120 70.8
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.5e-40 169.5 104 76.0
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 4.8e-39 165.2 101 71.3
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.4e-38 163.7 125 68.0
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.5e-37 158.7 141 56.0
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 4.9e-36 155.2 102 74.5
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 4.9e-36 155.2 143 57.3
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 6.5e-36 154.8 169 48.5
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.9e-35 153.3 89 77.5
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 7.1e-35 151.4 108 65.7
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 2.1e-34 149.8 150 50.0
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 2.3e-33 146.4 141 48.9
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 3.0e-33 146.0 137 51.1
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.3e-32 142.5 148 54.1
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 9.6e-32 141.0 109 66.1
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 9.6e-32 141.0 143 51.0
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 1.6e-31 140.2 99 65.7
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 3.7e-31 139.0 93 73.1
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 3.7e-31 139.0 115 53.0
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 1.8e-30 136.7 86 74.4
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 5.3e-30 135.2 86 73.3
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 5.9e-29 131.7 79 79.7
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 1.3e-28 130.6 105 61.9
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.7e-28 130.2 108 59.3
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-27 126.3 109 62.4
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.5e-27 126.3 80 71.2
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 1.6e-26 123.6 148 48.0
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.5e-24 116.3 137 43.8
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 1.6e-23 113.6 81 66.7
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.7e-23 112.5 141 47.5
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 6.9e-22 108.2 73 65.8
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 9.0e-22 107.8 143 42.7
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.9e-20 102.8 135 39.3
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 6.5e-20 101.7 85 56.5
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.5e-13 79.0 59 62.7
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 4.7e-10 68.9 45 73.3
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 2.3e-09 66.6 41 75.6
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 5.7e-08 62.0 48 60.4
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 1.7e-07 60.5 45 62.2


User provided reference genes

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