Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g11440 Coffea canephora HOM05D009881 ORTHO05D011059 1.2e-281 972.6 518 100.0
Dinv21695 Davidia involucrata HOM05D012601 ORTHO05D011059 6.1e-20 103.2 534 26.0
Oeu007318.1 Olea europaea HOM05D009881 ORTHO05D011059 2.6e-15 87.8 524 29.0
Nitab4.5_0000500g0180 Nicotiana tabacum HOM05D009881 ORTHO05D011059 8.5e-14 82.8 511 24.9
SGA_v2.0_scaffold69G23156 Striga asiatica HOM05D001352 ORTHO05D011059 8.5e-14 82.8 527 26.6
Nitab4.5_0012140g0020 Nicotiana tabacum HOM05D009881 ORTHO05D011059 4.7e-12 77.0 511 23.7
Dinv28869 Davidia involucrata HOM05D012601 ORTHO05D011059 6.1e-12 76.6 513 22.8
Ciclev10020707m.g Citrus clementina HOM05D017588 ORTHO05D019396 2.8e-09 67.8 215 29.8
Solyc08g077950.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 1.4e-08 65.5 514 23.2
Actinidia31496 Actinidia chinensis HOM05D012601 ORTHO05D011059 5.3e-08 63.5 515 25.0
Rhsim07G0119100 Rhododendron simsii HOM05D012601 ORTHO05D011059 7.0e-08 63.2 519 24.9
SGA_v2.0_scaffold199G41246 Striga asiatica HOM05D001352 ORTHO05D011059 2.0e-07 61.6 144 32.6
Sabra03G0053600 Salix brachista HOM05D017588 ORTHO05D019396 2.6e-07 61.2 165 35.8
PGSC0003DMG400026589 Solanum tuberosum HOM05D009881 ORTHO05D011059 2.6e-07 61.2 234 29.9
Dinv15587 Davidia involucrata HOM05D012601 ORTHO05D011059 3.5e-07 60.8 418 24.9
CSS0003836 Camellia sinensis var. sinensis HOM05D009881 ORTHO05D011059 4.5e-07 60.5 240 34.2
CiPaw.11G070200 Carya illinoinensis HOM05D016577 ORTHO05D013291 5.9e-07 60.1 214 34.1
PGSC0003DMG400026223 Solanum tuberosum HOM05D009881 ORTHO05D011059 1.7e-06 58.5 509 23.8
SGA_v2.0_scaffold69G23154 Striga asiatica HOM05D001103 ORTHO05D000954 2.2e-06 58.2 71 40.8
SGA_v2.0_scaffold104G30220 Striga asiatica HOM05D009881 ORTHO05D011059 2.9e-06 57.8 213 30.5
TAR375G0689 Trochodendron aralioides HOM05D012601 ORTHO05D011059 2.9e-06 57.8 551 24.3
Sopen08g026460 Solanum pennellii HOM05D009881 ORTHO05D011059 8.5e-06 56.2 511 22.1


User provided reference genes

Program Settings